RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 TISP43B9A030 160 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 CD58P19256 250 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 CTNNA2P26232 953 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 RPL10P27635 214 aaKnown RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 HOXD12P35452 270 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 TRIM28Q13263 835 aaKnown RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 KLC3Q6P597 504 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 B3GNT6Q6ZMB0 384 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 RNF111Q6ZNA4 994 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 ARID3BQ8IVW6 561 aaPredicted RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 RNF148Q8N7C7 305 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 TMIGD2Q96BF3 282 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 PTCD3Q96EY7 689 aaKnown RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 TMEM47Q9BQJ4 181 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 LZTS2Q9BRK4 669 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 OXCT2Q9BYC2 517 aaPredicted RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 MANSC1Q9H8J5 431 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 MROH7Q68CQ1 1323 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 C2CD2LO14523 706 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 LDHAP00338 332 aaKnown RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 RCAN1P53805 252 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 MTTPP55157 894 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 PDE1BQ01064 536 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 CHRNDQ07001 517 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 ITPRIPL1Q6GPH6 555 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 ZCCHC23Q6ZST2 131 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 GIPC3Q8TF64 312 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 SLC35B4Q969S0 331 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 CEP63Q96MT8 703 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 FHDC1Q9C0D6 1143 aaPredicted RBP15.18■□□□□ 0.02
CDT1-201ENST00000301019 STK17AQ9UEE5 414 aa15.18■□□□□ 0.02
CDT1-201ENST00000301019 BTNL10A8MVZ5 291 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 ERVV-1B6SEH8 477 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 PABPC4LP0CB38 370 aaKnown RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 CCDC166P0CW27 439 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 KRT10P13645 584 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 TSPY1Q01534 308 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 BTG3Q14201 252 aaPredicted RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 AMIGO2Q86SJ2 522 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 ZNF564Q8TBZ8 553 aaPredicted RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 ACAP3Q96P50 834 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 DDX25Q9UHL0 483 aaKnown RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 ZWINTO95229 277 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 SGPL1O95470 568 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 ENTPD1P49961 510 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 MECOMQ03112 1051 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 FOLH1Q04609 750 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 SPDYCQ5MJ68 293 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 DPY19L2P1Q6NXN4 242 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 ZNF804AQ7Z570 1209 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 SLC15A3Q8IY34 581 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 SH2D3AQ9BRG2 576 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 RAB34Q9BZG1 259 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 LRRC4BQ9NT99 713 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 ADGRA3Q8IWK6 1321 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 BTAF1O14981 1849 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 TMEM221A6NGB7 291 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 PRR5-ARHGAP8B1AHC4 643 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 TBC1D12O60347 775 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 CIITAP33076 1130 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 HOXD13P35453 343 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 ARHGAP8P85298 464 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 DCTN2Q13561 401 aaKnown RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 CCDC92Q53HC0 331 aaPredicted RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 ZNF362Q5T0B9 420 aaPredicted RBP15.17■□□□□ 0.02
CDT1-201ENST00000301019 ANO5Q75V66 913 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 SLC51AQ86UW1 340 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 MAPKAPK5Q8IW41 473 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 GRIN3AQ8TCU5 1115 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 PPP4R1Q8TF05 950 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 REEP2Q9BRK0 252 aa15.17■□□□□ 0.02
CDT1-201ENST00000301019 DYTNA2CJ06 578 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L15C9J2P7 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L13C9JLJ4 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L11C9JVI0 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L18D6R9N7 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L22D6RA61 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L17D6RBQ6 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 LAD1O00515 517 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 CHMP2AO43633 222 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 RALAP11233 206 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 ATF7P17544 494 aaPredicted RBP15.16■□□□□ 0.02
CDT1-201ENST00000301019 FGFR2P21802 821 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 GCAP28676 217 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 DMPKQ09013 629 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 GSTA3Q16772 222 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 KNOP1Q1ED39 458 aaKnown RBP15.16■□□□□ 0.02
CDT1-201ENST00000301019 FAM186BQ8IYM0 893 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDT1-201ENST00000301019 DGCR14Q96DF8 476 aaKnown RBP15.16■□□□□ 0.02
CDT1-201ENST00000301019 SLC13A1Q9BZW2 595 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms