RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZNF148Q9UQR1 794 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.65□□□□□ -0.22
HIF3A-204ENST00000300862 C19orf81C9J6K1 198 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 ATG7O95352 703 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 PIGRP01833 764 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 GJB1P08034 283 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 ENPEPQ07075 957 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 FASTKD3Q14CZ7 662 aaKnown RBP13.65□□□□□ -0.22
HIF3A-204ENST00000300862 TREML2Q5T2D2 321 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 NUGGCQ68CJ6 796 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 RBM15Q96T37 977 aaKnown RBP eCLIP13.65□□□□□ -0.22
HIF3A-204ENST00000300862 KDM4CQ9H3R0 1056 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.65□□□□□ -0.22
HIF3A-204ENST00000300862 SAE1Q9UBE0 346 aaPredicted RBP13.65□□□□□ -0.22
HIF3A-204ENST00000300862 AFG3L2Q9Y4W6 797 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 SCINQ9Y6U3 715 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 ADCY3O60266 1144 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 LDHAP00338 332 aaKnown RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 GHRP10912 638 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 TBXAS1P24557 533 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 KLRC2P26717 231 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 STAT5BP51692 787 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 TFAMQ00059 246 aaKnown RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 LY6KQ17RY6 165 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 TAB3Q8N5C8 712 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 TFAP2BQ92481 460 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 P3H4Q92791 437 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 SLITRK1Q96PX8 696 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 IMPG2Q9BZV3 1241 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 CCDC134Q9H6E4 229 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 GGA3Q9NZ52 723 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 TJP2Q9UDY2 1190 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 TMEM191CA6NGB0 347 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 ATP2A1O14983 1001 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 LIASO43766 372 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 STAM2O75886 525 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 ALDH5A1P51649 535 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 ORC1Q13415 861 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 MTM1Q13496 603 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 DOCK1Q14185 1865 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 FAM182AQ5T1J6 154 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 GPAT2Q6NUI2 795 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 VCPIP1Q96JH7 1222 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 NIFKQ9BYG3 293 aaKnown RBP13.64□□□□□ -0.23
HIF3A-204ENST00000300862 SAYSD1Q9NPB0 183 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 CISHQ9NSE2 258 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 BTBD7Q9P203 1132 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 IP6K2Q9UHH9 426 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 CNTN6Q9UQ52 1028 aa13.64□□□□□ -0.23
HIF3A-204ENST00000300862 SNX3O60493 162 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 ATP6V1G2O95670 118 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 ASS1P00966 412 aaKnown RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 IFNB1P01574 187 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 EZRP15311 586 aaKnown RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 TCF7P36402 384 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 MAGEA4P43358 317 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 ARSEP51690 589 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 DYNLT1P63172 113 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 CAV1Q03135 178 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 TMED2Q15363 201 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 SMTNL2Q2TAL5 461 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 TMEM63BQ5T3F8 832 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 HIBCHQ6NVY1 386 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 DNAJC24Q6P3W2 148 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 TRPM8Q7Z2W7 1104 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 WDTC1Q8N5D0 677 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 CEP120Q8N960 986 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 PAIP2Q9BPZ3 127 aaKnown RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 LRRD1A4D1F6 860 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 GOLGA8SH3BPF8 625 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 GOLGA8MH3BSY2 632 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 BANF1O75531 89 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 PIAS1O75925 651 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 ZNF132P52740 706 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 HIRAP54198 1017 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 GPS1Q13098 491 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 TARBP2Q15633 366 aaKnown RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 BRSK2Q8IWQ3 736 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 TMEM121Q9BTD3 319 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 NXF1Q9UBU9 619 aaKnown RBP13.63□□□□□ -0.23
HIF3A-204ENST00000300862 AGAP1Q9UPQ3 857 aa13.63□□□□□ -0.23
HIF3A-204ENST00000300862 SOWAHBA6NEL2 793 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 POC1B-GALNT4F8VUJ3 575 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 FAM189A1O60320 539 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 MSCO60682 206 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 SPAG7O75391 227 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms