RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 CCDC124Q96CT7 223 aaKnown RBP14.21□□□□□ -0.14
SKA3-201ENST00000298260 KREMEN1Q96MU8 473 aa14.21□□□□□ -0.14
SKA3-201ENST00000298260 SLC4A7Q9Y6M7 1214 aa14.21□□□□□ -0.14
SKA3-201ENST00000298260 IFNB1P01574 187 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 BCRP11274 1271 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 CDK16Q00536 496 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 TBC1D9BQ66K14 1250 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 SDCCAG8Q86SQ7 713 aaPredicted RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 ST13P4Q8IZP2 240 aaPredicted RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 PLEKHO2Q8TD55 490 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 CPA5Q8WXQ8 436 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 LENG1Q96BZ8 264 aaPredicted RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 CFAP57Q96MR6 1250 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 FAM111AQ96PZ2 611 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 MECRQ9BV79 373 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 TAF1LQ8IZX4 1826 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 A0A0J9YVX5 310 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 CCDC195A0A1B0GUA6 201 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 RPA1P27694 616 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 PEX2P28328 305 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 HOXA13P31271 388 aaPredicted RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 GPS1Q13098 491 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 MSLNQ13421 630 aaPredicted RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 GSTA3Q16772 222 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 C16orf86Q6ZW13 317 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 SCUBE1Q8IWY4 988 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 TRIM42Q8IWZ5 723 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 ULK2Q8IYT8 1036 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 SLCO2A1Q92959 643 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 OXNAD1Q96HP4 312 aaPredicted RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 ANGPTL2Q9UKU9 493 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 DNPEPQ9ULA0 475 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 TMCO1Q9UM00 188 aa14.2□□□□□ -0.14
SKA3-201ENST00000298260 RPL26L1Q9UNX3 145 aaKnown RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 SMG5Q9UPR3 1016 aaKnown RBP14.2□□□□□ -0.14
SKA3-201ENST00000298260 BUD23O43709 281 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 SUPT3HO75486 399 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 HNRNPCP07910 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
SKA3-201ENST00000298260 DLDP09622 509 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 ATP6V1B1P15313 513 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 TCF4P15884 667 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 MAGEA8P43361 318 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 TAS2R40P59535 323 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 BMT2Q1RMZ1 405 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 USH1GQ495M9 461 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 HSF5Q4G112 596 aaPredicted RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 RBM44Q6ZP01 1051 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 ARHGAP18Q8N392 663 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 ETNPPLQ8TBG4 499 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 CBWD1Q9BRT8 395 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 YIPF2Q9BWQ6 316 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 OSBPL8Q9BZF1 889 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 PPARGC1AQ9UBK2 798 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 ADSSP30520 456 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 GPX6P59796 221 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 RPS8P62241 208 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 ODR4Q5SWX8 454 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 FBXL19Q6PCT2 694 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 CEP70Q8NHQ1 597 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 MTMR4Q9NYA4 1195 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 PCDHA1Q9Y5I3 950 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 PIK3CDO00329 1044 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 PDE5AO76074 875 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 CYP1A2P05177 515 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 EEF2P13639 858 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 PCSK6P29122 969 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 ARSEP51690 589 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 ALDH18A1P54886 795 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 UBXN2AP68543 259 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 GK3PQ14409 553 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 RASA3Q14644 834 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 MSS51Q4VC12 460 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 FAM178BQ8IXR5 827 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 ZCCHC9Q8N567 271 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 OR6Y1Q8NGX8 325 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 ARHGEF1Q92888 912 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 CLMNQ96JQ2 1002 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 EIF2AK1Q9BQI3 630 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 LARSQ9P2J5 1176 aaKnown RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 ADAMTS6Q9UKP5 1117 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 PACSIN3Q9UKS6 424 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
SKA3-201ENST00000298260 SCN7AQ01118 1682 aa14.19□□□□□ -0.14
SKA3-201ENST00000298260 MYH11P35749 1972 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 ARHGAP42A6NI28 874 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 PENKP01210 267 aaPredicted RBP14.18□□□□□ -0.14
SKA3-201ENST00000298260 PABPC4LP0CB38 370 aaKnown RBP14.18□□□□□ -0.14
SKA3-201ENST00000298260 DESP17661 470 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 CRABP2P29373 138 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 EPHB1P54762 984 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 ARHGAP4P98171 946 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 SLC25A3Q00325 362 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 PDE1BQ01064 536 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 PLOD1Q02809 727 aaPredicted RBP14.18□□□□□ -0.14
SKA3-201ENST00000298260 PEX6Q13608 980 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 PARP10Q53GL7 1025 aa14.18□□□□□ -0.14
SKA3-201ENST00000298260 POU5F2Q8N7G0 328 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms