RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CDR2LQ86X02 465 aaPredicted RBP25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 GPRASP2Q96D09 838 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 KLF6Q99612 283 aaPredicted RBP25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 TCHPQ9BT92 498 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 TRABDQ9H4I3 376 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 EURLQ9NYK6 297 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 LGALS13Q9UHV8 139 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 ANP32DO95626 131 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 MAP3K10Q02779 954 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 NSUN6Q8TEA1 469 aaKnown RBP25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 NSMCE1Q8WV22 266 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 ZWILCHQ9H900 591 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 RXFP1Q9HBX9 757 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 PARVAQ9NVD7 372 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 CFAP73A6NFT4 308 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 GOLGA8RI6L899 631 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 GBP2P32456 591 aaPredicted RBP25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 PDIA2Q13087 525 aaKnown RBP25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 MTFR1Q15390 333 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 WDR72Q3MJ13 1102 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 TRABD2AQ86V40 505 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 MTMR12Q9C0I1 747 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 MYLK2Q9H1R3 596 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 ETNK1Q9HBU6 452 aa25.77■■□□□ 1.72
SPTSSA-201ENST00000298130 DNALI1O14645 258 aaPredicted RBP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 POTEJP0CG39 1038 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 HIRAP54198 1017 aaPredicted RBP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 OSTNP61366 133 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 TMEM132BQ14DG7 1078 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 SLC1A5Q15758 541 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 RTKN2Q8IZC4 609 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 ERP27Q96DN0 273 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 ITGBL1O95965 494 aaPredicted RBP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 TARSP26639 723 aaKnown RBP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 IL9RQ01113 521 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 ZNF268Q14587 947 aaPredicted RBP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 ERICH1Q86X53 443 aa25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 PHF13Q86YI8 300 aaPredicted RBP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 ALG13Q9NP73 1137 aaKnown RBP25.76■■□□□ 1.71
SPTSSA-201ENST00000298130 EIF4E1BA6NMX2 242 aaKnown RBP25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 TCEA3O75764 348 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 FGFR1P11362 822 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 GDF10P55107 478 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 MYL6P60660 151 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 CLDN10P78369 228 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 SPOCD1Q6ZMY3 1216 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 ANKRD35Q8N283 1001 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 KCNV2Q8TDN2 545 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 PHTF1Q9UMS5 762 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 CA4P22748 312 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 SSTR1P30872 391 aa25.75■■□□□ 1.71
SPTSSA-201ENST00000298130 TMEM191CA6NGB0 347 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 TMEM191BP0C7N4 346 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 MMP8P22894 467 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 CNTN2Q02246 1040 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 PRKG1Q13976 671 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 XKR3Q5GH77 459 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 ANKRD22Q5VYY1 191 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 DNAJC24Q6P3W2 148 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 ZNF449Q6P9G9 518 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 ZBED3Q96IU2 234 aaPredicted RBP25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 CFAP57Q96MR6 1250 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 IP6K2Q9UHH9 426 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 SCINQ9Y6U3 715 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 CNTNAP2Q9UHC6 1331 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 DIAPH2O60879 1101 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 ASMTLO95671 621 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 MSH2P43246 934 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 EN1Q05925 392 aaPredicted RBP25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 GPAT2Q6NUI2 795 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 EEPD1Q7L9B9 569 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 AGBL3Q8NEM8 1001 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 TFAP2BQ92481 460 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 HAO1Q9UJM8 370 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 ZNF214Q9UL59 606 aaPredicted RBP25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 KIAA1217Q5T5P2 1943 aa25.74■■□□□ 1.71
SPTSSA-201ENST00000298130 PPP1R21Q6ZMI0 780 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 ALLCQ8N6M5 410 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 BBOF1Q8ND07 529 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 MAGEC3Q8TD91 643 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 MAK16Q9BXY0 300 aaKnown RBP25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 ZNF302Q9NR11 478 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 MAP3K20Q9NYL2 800 aaKnown RBP25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 SUPT20HL2P0C7V6 817 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 CLNS1AP54105 237 aaKnown RBP25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 SUPT20HL1Q3ZLR7 823 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 MSS51Q4VC12 460 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 RDM1Q8NG50 284 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 CYP39A1Q9NYL5 469 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 TJP3O95049 919 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 BACE1P56817 501 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 VSIG1Q86XK7 387 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 RCOR2Q8IZ40 523 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 ARHGEF3Q9NR81 526 aa25.73■■□□□ 1.71
SPTSSA-201ENST00000298130 C1QBPQ07021 282 aaKnown RBP25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 EAPPQ56P03 285 aaPredicted RBP25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 WDTC1Q8N5D0 677 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 EMC1Q8N766 993 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 UTP4Q969X6 686 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms