RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 ESRRGP62508 458 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 GABPB1Q06547 395 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 IFT88Q13099 833 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 PDIA6Q15084 440 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SYCP2LQ5T4T6 812 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 NUDCD3Q8IVD9 361 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 FMR1NBQ8N0W7 255 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CALML6Q8TD86 181 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 DNAJB3Q8WWF6 145 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 OTULINQ96BN8 352 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 APOL5Q9BWW9 433 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 PITPNM3Q9BZ71 974 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CDV3Q9UKY7 258 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 ZNF609O15014 1411 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 HEATR9A2RTY3 570 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 GRID2IPA4D2P6 1211 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 MSH4O15457 936 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 MSCO60682 206 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CYP2C8P10632 490 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ACO1P21399 889 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 BRD2P25440 801 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CAPZA2P47755 286 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 EXOSC10Q01780 885 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 SP3Q02447 781 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 MTFR1Q15390 333 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 PCNX4Q63HM2 1172 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CES5AQ6NT32 575 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 STOX1Q6ZVD7 989 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 BTBD6Q96KE9 485 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CDK5RAP1Q96SZ6 601 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 BPIFA3Q9BQP9 254 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 VTA1Q9NP79 307 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 FBXL5Q9UKA1 691 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 H3BRB1 525 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 M0QYT0 321 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 OGTO15294 1046 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 PCDH8O95206 1070 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CYP11B2P19099 503 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 OXCT1P55809 520 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 UGP2Q16851 508 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 LY6KQ17RY6 165 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 SHC4Q6S5L8 630 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ARHGEF26Q96DR7 871 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 OSMRQ99650 979 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 EHD4Q9H223 541 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 TUT1Q9H6E5 874 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 SCHIP1Q9P0W5 487 aaPredicted RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 UVRAGQ9P2Y5 699 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 SPACA6W5XKT8 324 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 E9PCH4 1651 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 FAM187AA6NFU0 413 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 NCK2O43639 380 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 DCTN3O75935 186 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 POMCP01189 267 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CHRM3P20309 590 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 MRPS25P82663 173 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 FSCN1Q16658 493 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 HIF1AQ16665 826 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 METTL7BQ6UX53 244 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 TXNRD3Q86VQ6 643 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CATSPER3Q86XQ3 398 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ZNF507Q8TCN5 953 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 XPO6Q96QU8 1125 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 TMEM117Q9H0C3 514 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ASCC2Q9H1I8 757 aaPredicted RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ANLNQ9NQW6 1124 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 DDIT4Q9NX09 232 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 PSD3Q9NYI0 1048 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ANGPTL2Q9UKU9 493 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 NCKAP1Q9Y2A7 1128 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CNTNAP5Q8WYK1 1306 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 MADDQ8WXG6 1647 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 MYMKA6NI61 221 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 SPTLC1O15269 473 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 MEFVO15553 781 aaPredicted RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CAND2O75155 1236 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 EFEMP1Q12805 493 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ACVR2BQ13705 512 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 PLCL1Q15111 1095 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 TRADDQ15628 312 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 SEZ6Q53EL9 994 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 NUGGCQ68CJ6 796 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ANKMY2Q8IV38 441 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 NRBF2Q96F24 287 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 TSEN34Q9BSV6 310 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 PI4K2AQ9BTU6 479 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 ABHD16BQ9H3Z7 469 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 RUBCNLQ9H714 662 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 NSMCE4AQ9NXX6 385 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 LMTK2Q8IWU2 1503 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 SLC12A8A0AV02 714 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 STX7O15400 261 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 DYRK3O43781 588 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 CABYRO75952 493 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 APRTP07741 180 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 PSEN2P49810 448 aa7.24□□□□□ -1.25
GAPVD1-202ENST00000297933 FXR2P51116 673 aaKnown RBP eCLIP7.24□□□□□ -1.251e-6■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms