RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SIX4Q9UIU6 781 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 POLIQ9UNA4 740 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 SNX9Q9Y5X1 595 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 OR6C75A6NL08 312 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 PRRG1O14668 218 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CLSTN1O94985 981 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CYP11A1P05108 521 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 ATF2P15336 505 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 PSMC2P35998 433 aaKnown RBP12.99□□□□□ -0.33
HMGB2-201ENST00000296503 BIRC3Q13489 604 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 NFIL3Q16649 462 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 TPGS2Q68CL5 300 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CXorf38Q8TB03 319 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CD320Q9NPF0 282 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 TTC28Q96AY4 2481 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 NCOR1O75376 2440 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
HMGB2-201ENST00000296503 CETN3O15182 167 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 CCL16O15467 120 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 HNRNPA1P09651 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
HMGB2-201ENST00000296503 OR4Q2P0C623 313 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 KRT13P13646 458 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 AP3M2P53677 418 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 FAM193AP78312 1265 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 ADCY1Q08828 1119 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 COBLL1Q53SF7 1204 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 CCDC183Q5T5S1 534 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 CENPPQ6IPU0 288 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 RNF19BQ6ZMZ0 732 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 FAM186BQ8IYM0 893 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 ADSSL1Q8N142 457 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 PLEKHO2Q8TD55 490 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 EEF2KMTQ96G04 330 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 AFF4Q9UHB7 1163 aaKnown RBP12.98□□□□□ -0.33
HMGB2-201ENST00000296503 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
HMGB2-201ENST00000296503 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 PSMA7O14818 248 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 XYLBO75191 536 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 AKAP3O75969 853 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 LRG1P02750 347 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 VAMP7P51809 220 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 DLG4P78352 724 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 EDRF1Q3B7T1 1238 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 KLHL10Q6JEL2 608 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 TMC2Q8TDI7 906 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 ZNF707Q96C28 371 aaPredicted RBP12.97□□□□□ -0.33
HMGB2-201ENST00000296503 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 GDAP2Q9NXN4 497 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 MAPK13O15264 365 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 SEC24AO95486 1093 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 PPP1R2P41236 205 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 GPR17Q13304 367 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 MORC3Q14149 939 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 INTS8Q75QN2 995 aaKnown RBP12.97□□□□□ -0.33
HMGB2-201ENST00000296503 TCEAL8Q8IYN2 117 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 DHTKD1Q96HY7 919 aaPredicted RBP12.97□□□□□ -0.33
HMGB2-201ENST00000296503 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 L1RE1Q9UN81 338 aa12.97□□□□□ -0.33
HMGB2-201ENST00000296503 LOC730098B7Z3J9 87 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 IKBKBO14920 756 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 C4BPAP04003 597 aaKnown RBP12.96□□□□□ -0.33
HMGB2-201ENST00000296503 CCNE1P24864 410 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 HOXA9P31269 272 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 CDR1P51861 262 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 MYL6P60660 151 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 CLDN10P78369 228 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 FKBP3Q00688 224 aaKnown RBP12.96□□□□□ -0.33
HMGB2-201ENST00000296503 MYL7Q01449 175 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 DUSP4Q13115 394 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 SLC39A12Q504Y0 691 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 DNTTIP2Q5QJE6 756 aaKnown RBP12.96□□□□□ -0.33
HMGB2-201ENST00000296503 DPH6Q7L8W6 267 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 GRASPQ7Z6J2 395 aaPredicted RBP12.96□□□□□ -0.33
HMGB2-201ENST00000296503 TOP6BLQ8N6T0 577 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 KIAA1524Q8TCG1 905 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 ACSF2Q96CM8 615 aaPredicted RBP12.96□□□□□ -0.33
HMGB2-201ENST00000296503 RHOBTB2Q9BYZ6 727 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 MMRN2Q9H8L6 949 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.33
HMGB2-201ENST00000296503 DDX43Q9NXZ2 648 aaKnown RBP12.96□□□□□ -0.33
HMGB2-201ENST00000296503 MAFFQ9ULX9 164 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 VCANP13611 3396 aa12.96□□□□□ -0.33
HMGB2-201ENST00000296503 CUL9Q8IWT3 2517 aa12.96□□□□□ -0.34
HMGB2-201ENST00000296503 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 EPB41P11171 864 aaKnown RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 ATICP31939 592 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 GBP2P32456 591 aaPredicted RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 LHX1P48742 406 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 TNNC1P63316 161 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms