RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 USP11P51784 963 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 ERVK-9P63128 1117 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 CAV1Q03135 178 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-201ENST00000296215 E2F2Q14209 437 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 CTTNQ14247 550 aaKnown RBP12.26□□□□□ -0.45
SNIP1-201ENST00000296215 MESDQ14696 234 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TYSND1Q2T9J0 566 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 NECAB2Q7Z6G3 386 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 ARHGEF19Q8IW93 802 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 CKAP2Q8WWK9 683 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 USP20Q9Y2K6 914 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 SQORQ9Y6N5 450 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 CLRN2A0PK11 232 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 GAS2O43903 313 aaKnown RBP12.26□□□□□ -0.45
SNIP1-201ENST00000296215 USP1O94782 785 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 FBXO21O94952 628 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 DEXIO95424 95 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 SERPINB2P05120 415 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 POLR2MP0CAP2 368 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 RHAGQ02094 409 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 NIPAL4Q0D2K0 466 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TBCCQ15814 346 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PGS1Q32NB8 556 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 IGSF11Q5DX21 431 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 FAM117BQ6P1L5 589 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TMC4Q7Z404 712 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 NPLOC4Q8TAT6 608 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TRIM15Q9C019 465 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 AGPAT5Q9NUQ2 364 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 ANGEL1Q9UNK9 670 aaKnown RBP12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PLCL2Q9UPR0 1127 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 ADSLP30566 484 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 TRIM23P36406 574 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 HERVK_113P62684 666 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 GNA13Q14344 377 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 DGUOKQ16854 277 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 JADE1Q6IE81 842 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 POTEHQ6S545 545 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 UBASH3BQ8TF42 649 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 PBXIP1Q96AQ6 731 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 PHF20Q9BVI0 1012 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 ANKRD34BA5PLL1 514 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 E9PBE3 544 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 I3L521 148 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 TBX10O75333 385 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 IL12AP29459 219 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CDC16Q13042 620 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CMPK2Q5EBM0 449 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CLVS2Q5SYC1 327 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 IFIT1BQ5T764 474 aaKnown RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CORO6Q6QEF8 472 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 TTC7BQ86TV6 843 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 BBS5Q8N3I7 341 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 P2RX5Q93086 422 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 TOR3AQ9H497 397 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 EPB41L4AQ9HCS5 686 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 MCM9Q9NXL9 1143 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 MARCOQ9UEW3 520 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 E7EWF7 191 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 SSX5O60225 188 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 PAEPP09466 180 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CCNG1P51959 295 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 UBE3AQ05086 875 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CCDC137Q6PK04 289 aaKnown RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CYB5R4Q7L1T6 521 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 OR8H2Q8N162 312 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 INPP4AQ96PE3 977 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 BBS2Q9BXC9 721 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 UNKQ9C0B0 810 aaKnown RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 VPS45Q9NRW7 570 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 MLXQ9UH92 298 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 PRR23AA6NEV1 266 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 TRIM24O15164 1050 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 NCAM2O15394 837 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 SPDYAQ5MJ70 313 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 LPCAT4Q643R3 524 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 SHC4Q6S5L8 630 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 AMIGO2Q86SJ2 522 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 TICAM1Q8IUC6 712 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 BBS7Q8IWZ6 715 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 RBM15Q96T37 977 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNIP1-201ENST00000296215 CDH19Q9H159 772 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 SMARCAD1Q9H4L7 1026 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 DNM3Q9UQ16 869 aa12.25□□□□□ -0.45
SNIP1-201ENST00000296215 KRT1P04264 644 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 NEK3P51956 506 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 CENPCQ03188 943 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 MFSD6Q6ZSS7 791 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 DNAJC12Q9UKB3 198 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 AURKCQ9UQB9 309 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms