RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PTCD3Q96EY7 689 aaKnown RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 FAM111AQ96PZ2 611 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 ACCSQ96QU6 501 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 WDR18Q9BV38 432 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 FAM192AQ9GZU8 254 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 TUFT1Q9NNX1 390 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 MARCOQ9UEW3 520 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CCDC195A0A1B0GUA6 201 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 FAM237BA0A1B0GVD1 139 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ARHGAP42A6NI28 874 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 LPXNO60711 386 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 MT-ND3P03897 115 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 CYP1A1P04798 512 aaPredicted RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ADRB2P07550 413 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 CCNFP41002 786 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 GEMIN4P57678 1058 aaKnown RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 DEUP1Q05D60 604 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 RASA2Q15283 850 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 PALM2Q8IXS6 379 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ST13P4Q8IZP2 240 aaPredicted RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 TAS1R2Q8TE23 839 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 SHC3Q92529 594 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 NMUR2Q9GZQ4 415 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 LMCD1Q9NZU5 365 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 IKBKGQ9Y6K9 419 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ARFGEF1Q9Y6D6 1849 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 SLC16A4O15374 487 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 GDF11O95390 407 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 KRT1P04264 644 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ANPEPP15144 967 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 SLC1A1P43005 524 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 PSMC4P43686 418 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 SCNN1BP51168 640 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 GAD2Q05329 585 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 MTMR2Q13614 643 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 SLC15A2Q16348 729 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 C1orf220Q5T0J3 134 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 SYCP2LQ5T4T6 812 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 RIPOR1Q6ZS17 1223 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ANKS1BQ7Z6G8 1248 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 MCOLN2Q8IZK6 566 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ARHGAP18Q8N392 663 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 FBXO27Q8NI29 283 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 NMD3Q96D46 503 aaKnown RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 PAFAH2Q99487 392 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 ECSITQ9BQ95 431 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 IQCGQ9H095 443 aaKnown RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 RANBP17Q9H2T7 1088 aaKnown RBP10.81□□□□□ -0.68
LMX1A-201ENST00000294816 SMYD3Q9H7B4 428 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 CYLDQ9NQC7 956 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 IRS2Q9Y4H2 1338 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 MYH11P35749 1972 aa10.81□□□□□ -0.68
LMX1A-201ENST00000294816 C3orf62Q6ZUJ4 267 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 RHPN2Q8IUC4 686 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 RILPQ96NA2 401 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 ZNF577Q9BSK1 485 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 TMEM121Q9BTD3 319 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 SPATA16Q9BXB7 569 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 RHBDL2Q9NX52 303 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 RAB20Q9NX57 234 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 MTO1Q9Y2Z2 717 aaKnown RBP10.8□□□□□ -0.68
LMX1A-201ENST00000294816 UBE4BO95155 1302 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 F5H6K3 240 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 KLRC2P26717 231 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 AP2B1P63010 937 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 HIF1AQ16665 826 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 LIN52Q52LA3 116 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 LMBRD2Q68DH5 695 aaPredicted RBP10.8□□□□□ -0.68
LMX1A-201ENST00000294816 RASSF3Q86WH2 238 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 SCUBE1Q8IWY4 988 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 SMC1BQ8NDV3 1235 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 DTNBP1Q96EV8 351 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 OXNAD1Q96HP4 312 aaPredicted RBP10.8□□□□□ -0.68
LMX1A-201ENST00000294816 TMEM206Q9H813 350 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 UMODL1Q5DID0 1318 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 MAST2Q6P0Q8 1798 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 A6NJR5 290 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 MEI4A8MW99 385 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 PHBP35232 272 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 ALDH18A1P54886 795 aaKnown RBP10.8□□□□□ -0.68
LMX1A-201ENST00000294816 PEX3P56589 373 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 LMNB2Q03252 620 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 FAM182AQ5T1J6 154 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 LIN9Q5TKA1 542 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 KRT39Q6A163 491 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 DAW1Q8N136 415 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 UNC45AQ9H3U1 944 aa10.8□□□□□ -0.68
LMX1A-201ENST00000294816 TMEM150BA6NC51 233 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 P4HA2O15460 535 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 PROSCO94903 275 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 NFX1Q12986 1120 aaKnown RBP10.79□□□□□ -0.68
LMX1A-201ENST00000294816 TDRPQ86YL5 185 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 SLC9A9Q8IVB4 645 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 ZNF398Q8TD17 642 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 CRYGNQ8WXF5 182 aa10.79□□□□□ -0.68
LMX1A-201ENST00000294816 JDP2Q8WYK2 163 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms