RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TUBP50607 506 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 DNAJC24Q6P3W2 148 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 SLC30A9Q6PML9 568 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 DSTYKQ6XUX3 929 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 TMEM161BQ8NDZ6 487 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 C10orf82Q8WW14 230 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 CYTH2Q99418 400 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 IDI2Q9BXS1 227 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 MOV10L1Q9BXT6 1211 aaKnown RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 CPSF2Q9P2I0 782 aaKnown RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 SEPT9Q9UHD8 586 aaPredicted RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 WFS1O76024 890 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 SERPINB3P29508 390 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 YWHAGP61981 247 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCNF-201ENST00000293968 PSMC5P62195 406 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 SNX30Q5VWJ9 437 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 EXD1Q8NHP7 514 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 UCMAQ8WVF2 138 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 TSSK1BQ9BXA7 367 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 MANSC1Q9H8J5 431 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 ARL8BQ9NVJ2 186 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 AP1G2O75843 785 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 KITP10721 976 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 ATP6V1C1P21283 382 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 ALDH1B1P30837 517 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 GRIK3Q13003 919 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 MOGSQ13724 837 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 KCNT1Q5JUK3 1230 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 BSNDQ8WZ55 320 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 RBM41Q96IZ5 413 aaKnown RBP15.5■□□□□ 0.07
CCNF-201ENST00000293968 SH3GL3Q99963 347 aa15.5■□□□□ 0.07
CCNF-201ENST00000293968 MYPNQ86TC9 1320 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 CCDC195A0A1B0GUA6 201 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 ATP9AO75110 1047 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 MRPS35P82673 323 aaKnown RBP15.49■□□□□ 0.07
CCNF-201ENST00000293968 SPP2Q13103 211 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 CLNKQ7Z7G1 428 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
CCNF-201ENST00000293968 FEZF2Q8TBJ5 459 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 PAFAH2Q99487 392 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 SENP7Q9BQF6 1050 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 DCLRE1BQ9H816 532 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 AGO4Q9HCK5 861 aaKnown RBP15.49■□□□□ 0.07
CCNF-201ENST00000293968 AVENQ9NQS1 362 aaPredicted RBP15.49■□□□□ 0.07
CCNF-201ENST00000293968 NMRK1Q9NWW6 199 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 SENP1Q9P0U3 644 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 GABBR1Q9UBS5 961 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 SCOCQ9UIL1 159 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 LPXNO60711 386 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 CCDC22O60826 627 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 EAPPQ56P03 285 aaPredicted RBP15.49■□□□□ 0.07
CCNF-201ENST00000293968 NLRX1Q86UT6 975 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 C12orf56Q8IXR9 622 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 FAM161BQ96MY7 647 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 TAAR1Q96RJ0 339 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 TCHPQ9BT92 498 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 CHMP2BQ9UQN3 213 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 SCINQ9Y6U3 715 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 SMCHD1A6NHR9 2005 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 SKIP12755 728 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 GNAZP19086 355 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 KLRC2P26717 231 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 KLF1Q13351 362 aaPredicted RBP15.49■□□□□ 0.07
CCNF-201ENST00000293968 CYP4A22Q5TCH4 519 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 DPH6Q7L8W6 267 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 KATNAL2Q8IYT4 538 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 ASAP3Q8TDY4 903 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 FAM111AQ96PZ2 611 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 PARVAQ9NVD7 372 aa15.49■□□□□ 0.07
CCNF-201ENST00000293968 UBTFL6P0CB48 400 aaPredicted RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 NPR1P16066 1061 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 GCAP28676 217 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 THOC5Q13769 683 aaKnown RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 RBBP5Q15291 538 aaKnown RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 WASHC2DQ5SRD0 308 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 RNF220Q5VTB9 566 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 SCARA5Q6ZMJ2 495 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 RCOR2Q8IZ40 523 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 CFAP61Q8NHU2 1237 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 MARCOQ9UEW3 520 aaPredicted RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 IP6K2Q9UHH9 426 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 ASTN2O75129 1339 aaPredicted RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 SPATA31A6Q5VVP1 1343 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 VHLP40337 213 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 ARL4CP56559 192 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 MTERF2Q49AM1 385 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 CDCA2Q69YH5 1023 aaPredicted RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 TXNRD3NBQ6F5E7 133 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 ENOSF1Q7L5Y1 443 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 FBXO36Q8NEA4 188 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 SCG3Q8WXD2 468 aaKnown RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 SYT15Q9BQS2 421 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 IMPG2Q9BZV3 1241 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 SYNCQ9H7C4 482 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 TMX2Q9Y320 296 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 LRRIQ4A6NIV6 560 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 ABHD2P08910 425 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 MAPTP10636 758 aaKnown RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 FGFR1P11362 822 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms