RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 C3orf70A6NLC5 250 aaPredicted RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 SLC1A1P43005 524 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 ABCE1P61221 599 aaKnown RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 GALNTL6Q49A17 601 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 LRRC8BQ6P9F7 803 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 DENND5BQ6ZUT9 1274 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 ASAP3Q8TDY4 903 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 BHMTQ93088 406 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 C2orf40Q9H1Z8 148 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 NOD2Q9HC29 1040 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 NDUFS3O75489 264 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 GRIN1Q05586 938 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 BYSLQ13895 437 aaKnown RBP16.83■□□□□ 0.29
SSRP1-202ENST00000293880 DUOXA2Q1HG44 320 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 FAM20AQ96MK3 541 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 SEPT5Q99719 369 aaPredicted RBP16.83■□□□□ 0.29
SSRP1-202ENST00000293880 TRIM39Q9HCM9 518 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 GSG1L2A8MUP6 293 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 IGKV5-2P06315 115 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 PDGFRAP16234 1089 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 DNAJC3Q13217 504 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 ZRANB3Q5FWF4 1079 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 TTC33Q6PID6 262 aaPredicted RBP16.83■□□□□ 0.29
SSRP1-202ENST00000293880 MTHFD1LQ6UB35 978 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 GLMNQ92990 594 aa16.83■□□□□ 0.29
SSRP1-202ENST00000293880 UNKQ9C0B0 810 aaKnown RBP16.83■□□□□ 0.29
SSRP1-202ENST00000293880 USP6P35125 1406 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 ADGRL3Q9HAR2 1447 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 TAP1Q03518 808 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 LRRC34Q8IZ02 419 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 CERKQ8TCT0 537 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 CASKIN2Q8WXE0 1202 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 NSL1Q96IY1 281 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 CCDC134Q9H6E4 229 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 RAD18Q9NS91 495 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 TMEM191CA6NGB0 347 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 GSNP06396 782 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 TFE3P19532 575 aaPredicted RBP16.83■□□□□ 0.28
SSRP1-202ENST00000293880 SCARF1Q14162 830 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 SLC18A3Q16572 532 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 PLEKHA8Q96JA3 519 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 ZFP42Q96MM3 310 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 SLC39A10Q9ULF5 831 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 ABCA8O94911 1581 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 A0A1W2PQC6 194 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 C16orf96A6NNT2 1141 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 DDHD2O94830 711 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 KCNK10P57789 538 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 PPP1R18Q6NYC8 613 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 SHCBP1Q8NEM2 672 aa16.83■□□□□ 0.28
SSRP1-202ENST00000293880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.83■□□□□ 0.287e-7■■□□□ 13.4
SSRP1-202ENST00000293880 FARP1Q9Y4F1 1045 aaPredicted RBP16.83■□□□□ 0.28
SSRP1-202ENST00000293880 USP1O94782 785 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 PDHBP11177 359 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 PTGISQ16647 500 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 TRIM72Q6ZMU5 477 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
SSRP1-202ENST00000293880 C18orf8Q96DM3 657 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 A0A1B0GTH6 734 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 CCT8L1PA6NM43 557 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 SFNP31947 248 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 RFX3P48380 749 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 C10orf88Q9H8K7 445 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 LATS2Q9NRM7 1088 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 HOXC10Q9NYD6 342 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 PIM2Q9P1W9 311 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 PLEKP08567 350 aaPredicted RBP16.82■□□□□ 0.28
SSRP1-202ENST00000293880 GTF2H3Q13889 308 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 NOA1Q8NC60 698 aaKnown RBP16.82■□□□□ 0.28
SSRP1-202ENST00000293880 HIC2Q96JB3 615 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 DONSONQ9NYP3 566 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 SPATA2Q9UM82 520 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 SPATA31A3Q5VYP0 1347 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 ASNSP08243 561 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 HOXA7P31268 230 aaPredicted RBP16.82■□□□□ 0.28
SSRP1-202ENST00000293880 SRPK1Q96SB4 655 aaKnown RBP16.82■□□□□ 0.28
SSRP1-202ENST00000293880 KLHL31Q9H511 634 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 HIST1H2AGP0C0S8 130 aaPredicted RBP16.82■□□□□ 0.28
SSRP1-202ENST00000293880 TCF3P15923 654 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 HIST1H2ADP20671 130 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 PTPN7P35236 360 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 SPP2Q13103 211 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 MTMR2Q13614 643 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 RASGRP2Q7LDG7 609 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 OTOAQ7RTW8 1153 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 HIST1H2AHQ96KK5 128 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 HIST1H2AJQ99878 128 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 H2AFJQ9BTM1 129 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 ERCC6L2Q5T890 1561 aa16.82■□□□□ 0.28
SSRP1-202ENST00000293880 PFASO15067 1338 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 PYGMP11217 842 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 EPB42P16452 691 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 ITIH2P19823 946 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 FMO5P49326 533 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 HSD17B4P51659 736 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 ALFQ53S48 1182 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 C2CD6Q53TS8 623 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms