RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 PTPRN2Q92932 1015 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 STAMBPL1Q96FJ0 436 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 KCNK16Q96T55 309 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 KDM4CQ9H3R0 1056 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 DBR1Q9UK59 544 aaKnown RBP13.38□□□□□ -0.27
PTCD1-201ENST00000292478 MAPK7Q13164 816 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 INPP5AQ14642 412 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 C3orf62Q6ZUJ4 267 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 SLC26A7Q8TE54 656 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 KRT4P19013 534 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 TCF7P36402 384 aaPredicted RBP13.38□□□□□ -0.27
PTCD1-201ENST00000292478 GNL1P36915 607 aaPredicted RBP13.38□□□□□ -0.27
PTCD1-201ENST00000292478 C16orf89Q6UX73 402 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 LINC00523Q86TU6 105 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 THAP2Q9H0W7 228 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 POLLQ9UGP5 575 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 RARBP10826 455 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 GEMIN4P57678 1058 aaKnown RBP13.38□□□□□ -0.27
PTCD1-201ENST00000292478 NAPEPLDQ6IQ20 393 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 C4orf19Q8IY42 314 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 GOLPH3Q9H4A6 298 aa13.38□□□□□ -0.27
PTCD1-201ENST00000292478 FAM107AO95990 144 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 RPLP2P05387 115 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 SUPT20HL2P0C7V6 817 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 GFAPP14136 432 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 KCNA2P16389 499 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 SLC26A2P50443 739 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 CASP7P55210 303 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 PDAP1Q13442 181 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 USP10Q14694 798 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 LBRQ14739 615 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 SEMA6BQ9H3T3 888 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 OLFML3Q9NRN5 406 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 METTL5Q9NRN9 209 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 WHRNQ9P202 907 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 TMEM120BA0PK00 339 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 LRRIQ3A6PVS8 624 aaPredicted RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 MYL2P10916 166 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 KDM7AQ6ZMT4 941 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 EFL1Q7Z2Z2 1120 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 RAB42Q8N4Z0 105 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 SYCE1LA8MT33 242 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 ANGPT2O15123 496 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 VDRP11473 427 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 DYNC1I2Q13409 638 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 PKN1Q16512 942 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 KYNUQ16719 465 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 TRPM8Q7Z2W7 1104 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 DCUN1D1Q96GG9 259 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 IRAK4Q9NWZ3 460 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 PPP2R3BQ9Y5P8 575 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 A0A087X0T9 212 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 APOA4P06727 396 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 PDGFRBP09619 1106 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 FAM228BP0C875 321 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 PDK2Q15119 407 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 STKLD1Q8NE28 680 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 CYP4F11Q9HBI6 524 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 ARHGAP26Q9UNA1 814 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 CHMP2BQ9UQN3 213 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 TLR2O60603 784 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 GYS1P13807 737 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 NLRP11P59045 1033 aaKnown RBP13.37□□□□□ -0.27
PTCD1-201ENST00000292478 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 PCDHGB4Q9UN71 923 aa13.37□□□□□ -0.27
PTCD1-201ENST00000292478 TMEM131LA2VDJ0 1609 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 VWDEQ8N2E2 1590 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 LSM8O95777 96 aaKnown RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 IRAK1P51617 712 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 ALDH18A1P54886 795 aaKnown RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 MCL1Q07820 350 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 PTK6Q13882 451 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 ACCSLQ4AC99 568 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 LRRC8EQ6NSJ5 796 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 GJB7Q6PEY0 223 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 GLB1LQ6UWU2 654 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 CDY2AQ9Y6F7 541 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 CDY1Q9Y6F8 540 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 FOXN3O00409 490 aaPredicted RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 DPEP1P16444 411 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 HSD17B3P37058 310 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 ZNF720Q7Z2F6 126 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 DNAJC6O75061 913 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 PYGLP06737 847 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 FAM200BP0CF97 657 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 PTGISQ16647 500 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 MPZL3Q6UWV2 235 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 C4orf33Q8N1A6 199 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms