RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 C15orf39Q6ZRI6 1047 aa16.5■□□□□ 0.23
NCK1-201ENST00000288986 MICALL1Q8N3F8 863 aa16.5■□□□□ 0.23
NCK1-201ENST00000288986 OR8K1Q8NGG5 319 aa16.5■□□□□ 0.23
NCK1-201ENST00000288986 RIN2Q8WYP3 895 aaPredicted RBP16.5■□□□□ 0.23
NCK1-201ENST00000288986 HERC2P3Q9BVR0 1158 aa16.5■□□□□ 0.23
NCK1-201ENST00000288986 TIMM13Q9Y5L4 95 aaPredicted RBP16.5■□□□□ 0.23
NCK1-201ENST00000288986 SNX9Q9Y5X1 595 aa16.5■□□□□ 0.23
NCK1-201ENST00000288986 MYO7AQ13402 2215 aa16.5■□□□□ 0.23
NCK1-201ENST00000288986 COL6A3P12111 3177 aa16.5■□□□□ 0.23
NCK1-201ENST00000288986 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.49■□□□□ 0.23
NCK1-201ENST00000288986 HIDE1A8MVS5 230 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 M0QZQ0 153 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 NOL4O94818 638 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 VNN1O95497 513 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 FGFR3P22607 806 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 PIK3CAP42336 1068 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 DSG1Q02413 1049 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 MEA1Q16626 185 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 WDR72Q3MJ13 1102 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 CBWD6Q4V339 395 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 CBWD3Q5JTY5 395 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 CBWD5Q5RIA9 395 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.49■□□□□ 0.23
NCK1-201ENST00000288986 MRPL43Q8N983 215 aaKnown RBP16.49■□□□□ 0.23
NCK1-201ENST00000288986 SSX2IPQ9Y2D8 614 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 CYB561D2O14569 222 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 FSCN2O14926 492 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 SYN3O14994 580 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 HNRNPH3P31942 346 aaKnown RBP16.49■□□□□ 0.23
NCK1-201ENST00000288986 PTPN14Q15678 1187 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 SGSM1Q2NKQ1 1148 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 KIAA0319Q5VV43 1072 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 RBM23Q86U06 439 aaKnown RBP16.49■□□□□ 0.23
NCK1-201ENST00000288986 APPL2Q8NEU8 664 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 TAS1R2Q8TE23 839 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 PLCB1Q9NQ66 1216 aa16.49■□□□□ 0.23
NCK1-201ENST00000288986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.49■□□□□ 0.23
NCK1-201ENST00000288986 SCN1AP35498 2009 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 C2orf71A6NGG8 1288 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 HUS1O60921 280 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 HLA-DRAP01903 254 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 ODC1P11926 461 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 POU3F3P20264 500 aaPredicted RBP16.48■□□□□ 0.23
NCK1-201ENST00000288986 ATICP31939 592 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 FMO5P49326 533 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 ZNF699Q32M78 642 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 PRSS55Q6UWB4 352 aaPredicted RBP16.48■□□□□ 0.23
NCK1-201ENST00000288986 TMTC1Q8IUR5 882 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
NCK1-201ENST00000288986 FBXL13Q8NEE6 735 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 BAP1Q92560 729 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 ELMO3Q96BJ8 720 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 IMPG2Q9BZV3 1241 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 CEP72Q9P209 647 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 NXF1Q9UBU9 619 aaKnown RBP16.48■□□□□ 0.23
NCK1-201ENST00000288986 PCDHB8Q9UN66 801 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 IRAK3Q9Y616 596 aa16.48■□□□□ 0.23
NCK1-201ENST00000288986 PRRC2BQ5JSZ5 2229 aaKnown RBP16.48■□□□□ 0.23
NCK1-201ENST00000288986 ARHGEF37A1IGU5 675 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 PER2O15055 1255 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 PMM2O15305 246 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 YWHAHQ04917 246 aaPredicted RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 CETN1Q12798 172 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 VARS2Q5ST30 1063 aaKnown RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 WDR59Q6PJI9 974 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 NEK11Q8NG66 645 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 LNX1Q8TBB1 728 aaPredicted RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 PPP2R3CQ969Q6 453 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 PI4K2AQ9BTU6 479 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 XYLT2Q9H1B5 865 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 GANQ9H2C0 597 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 FAM207AQ9NSI2 230 aaPredicted RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 RAB20Q9NX57 234 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 GDAP2Q9NXN4 497 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 COL4A4P53420 1690 aaPredicted RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 CDK17Q00537 523 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 CCDC85BQ15834 202 aaPredicted RBP16.47■□□□□ 0.23
NCK1-201ENST00000288986 PSMD5Q16401 504 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 ANKS3Q6ZW76 656 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 ADGRD2Q7Z7M1 963 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 GLYCTKQ8IVS8 523 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 PIK3R5Q8WYR1 880 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 EMILIN2Q9BXX0 1053 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 IGFLR1Q9H665 355 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 TLE6Q9H808 572 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 FBXL5Q9UKA1 691 aa16.47■□□□□ 0.23
NCK1-201ENST00000288986 USP27XA6NNY8 438 aa16.46■□□□□ 0.23
NCK1-201ENST00000288986 P4HA2O15460 535 aa16.46■□□□□ 0.23
NCK1-201ENST00000288986 LILRB3O75022 631 aa16.46■□□□□ 0.23
NCK1-201ENST00000288986 N4BP1O75113 896 aaKnown RBP16.46■□□□□ 0.23
NCK1-201ENST00000288986 LRRN2O75325 713 aa16.46■□□□□ 0.23
NCK1-201ENST00000288986 CNPP09543 421 aaKnown RBP16.46■□□□□ 0.23
NCK1-201ENST00000288986 RPL17P18621 184 aaKnown RBP16.46■□□□□ 0.23
NCK1-201ENST00000288986 PON1P27169 355 aa16.46■□□□□ 0.23
NCK1-201ENST00000288986 TNNC1P63316 161 aa16.46■□□□□ 0.23
NCK1-201ENST00000288986 MYL7Q01449 175 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms