RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CEBPZQ03701 1054 aaKnown RBP15.17■□□□□ 0.02
TPM1-202ENST00000288398 MTAPQ13126 283 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 GPR158Q5T848 1215 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 SLC39A4Q6P5W5 647 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 CCDC73Q6ZRK6 1079 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 DNAJB7Q7Z6W7 309 aaPredicted RBP15.17■□□□□ 0.02
TPM1-202ENST00000288398 NT5DC4Q86YG4 428 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 DCP1BQ8IZD4 617 aaKnown RBP15.17■□□□□ 0.02
TPM1-202ENST00000288398 GPR161Q8N6U8 529 aaKnown RBP15.17■□□□□ 0.02
TPM1-202ENST00000288398 C2orf15Q8WU43 125 aaKnown RBP15.17■□□□□ 0.02
TPM1-202ENST00000288398 C8orf33Q9H7E9 229 aaPredicted RBP15.17■□□□□ 0.02
TPM1-202ENST00000288398 LMAN1LQ9HAT1 526 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 THG1LQ9NWX6 298 aaKnown RBP15.17■□□□□ 0.02
TPM1-202ENST00000288398 PCDHB13Q9Y5F0 798 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 CLIC4Q9Y696 253 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 CHADO15335 359 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 SOAT2O75908 522 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 LDHAP00338 332 aaKnown RBP15.16■□□□□ 0.02
TPM1-202ENST00000288398 CYP11A1P05108 521 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 CCNE1P24864 410 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 STAT6P42226 847 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 ARHGAP29Q52LW3 1261 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 TSSK4Q6SA08 328 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 STXBP4Q6ZWJ1 553 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 ZNF720Q7Z2F6 126 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 TMC8Q8IU68 726 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 ARID3BQ8IVW6 561 aaPredicted RBP15.16■□□□□ 0.02
TPM1-202ENST00000288398 SPPL2BQ8TCT7 592 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 LRRC15Q8TF66 581 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 CACTINQ8WUQ7 758 aaKnown RBP15.16■□□□□ 0.02
TPM1-202ENST00000288398 FAM213AQ9BRX8 229 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 DNAJC25Q9H1X3 360 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 CHRDQ9H2X0 955 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 CRISPLD1Q9H336 500 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 PRMT8Q9NR22 394 aaPredicted RBP15.16■□□□□ 0.02
TPM1-202ENST00000288398 TBC1D7Q9P0N9 293 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 GMEB2Q9UKD1 530 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 SMG5Q9UPR3 1016 aaKnown RBP15.16■□□□□ 0.02
TPM1-202ENST00000288398 SRPRBQ9Y5M8 271 aaKnown RBP15.16■□□□□ 0.02
TPM1-202ENST00000288398 COL4A3Q01955 1670 aa15.16■□□□□ 0.02
TPM1-202ENST00000288398 ANO9A1A5B4 782 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 KPNA7A9QM74 516 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 TISP43B9A030 160 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 VNN2O95498 520 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 MLLT6P55198 1093 aaPredicted RBP15.15■□□□□ 0.02
TPM1-202ENST00000288398 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
TPM1-202ENST00000288398 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 ALCAMQ13740 583 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 PTPAQ15257 358 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 L1TD1Q5T7N2 865 aaKnown RBP15.15■□□□□ 0.02
TPM1-202ENST00000288398 POTEHQ6S545 545 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 DGLUCYQ7Z3D6 616 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 OR10T2Q8NGX3 314 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 TMEM209Q96SK2 561 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 FIZ1Q96SL8 496 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 LPIN3Q9BQK8 851 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 ZCWPW1Q9H0M4 648 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 ABI2Q9NYB9 513 aaPredicted RBP15.15■□□□□ 0.02
TPM1-202ENST00000288398 ZMYM5Q9UJ78 669 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
TPM1-202ENST00000288398 STYXL1Q9Y6J8 313 aa15.15■□□□□ 0.02
TPM1-202ENST00000288398 EP300Q09472 2414 aaPredicted RBP15.15■□□□□ 0.02
TPM1-202ENST00000288398 SLC38A8A6NNN8 435 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 NRG2O14511 850 aaPredicted RBP15.14■□□□□ 0.01
TPM1-202ENST00000288398 HUS1O60921 280 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 SDHBP21912 280 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 AVPR1AP37288 418 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 CXCL12P48061 93 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 FCHO2Q0JRZ9 810 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 CUL4AQ13619 759 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 PUM1Q14671 1186 aaKnown RBP eCLIP15.14■□□□□ 0.015e-9■□□□□ 8.1
TPM1-202ENST00000288398 STXBP5Q5T5C0 1151 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 WSCD1Q658N2 575 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 USP49Q70CQ1 688 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 GPIHBP1Q8IV16 184 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 DCLK2Q8N568 766 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 TTC9BQ8N6N2 239 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 SUMF1Q8NBK3 374 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 ZBTB44Q8NCP5 570 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 GIPC2Q8TF65 315 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 LRRC3Q9BY71 257 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 LRRC27Q9C0I9 530 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 TASP1Q9H6P5 420 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 OBP2AQ9NY56 170 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 RBAKQ9NYW8 714 aaPredicted RBP15.14■□□□□ 0.01
TPM1-202ENST00000288398 PCDHB5Q9Y5E4 795 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 WDR87Q6ZQQ6 2873 aa15.14■□□□□ 0.01
TPM1-202ENST00000288398 CACNA1IQ9P0X4 2223 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 MYMKA6NI61 221 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 KRT19P08727 400 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 SYT1P21579 422 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 CDR1P51861 262 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 CYP4F8P98187 520 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 MYL7Q01449 175 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 BFSP1Q12934 665 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 NFE2Q16621 373 aaPredicted RBP15.13■□□□□ 0.01
TPM1-202ENST00000288398 DGKKQ5KSL6 1271 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 GAREM2Q75VX8 874 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 RALGPS2Q86X27 583 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms