RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TAF4BQ92750 862 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 PPP1R9BQ96SB3 815 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 HGH1Q9BTY7 390 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 LDAHQ9H6V9 325 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 COPS7BQ9H9Q2 264 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 MYO1GB0I1T2 1018 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ALBP02768 609 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 NFICP08651 508 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 HNRNPA1P09651 372 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD1-201ENST00000284049 HLA-DPA1P20036 260 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 LIFRP42702 1097 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 MAP2K3P46734 347 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 KCNC1P48547 511 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 VAMP2P63027 116 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CRYMQ14894 314 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 MAN2A1Q16706 1144 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 WDR72Q3MJ13 1102 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ZSCAN23Q3MJ62 389 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CACHD1Q5VU97 1274 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 NLRP14Q86W24 1093 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 PQLC1Q8N2U9 271 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 NEDD1Q8NHV4 660 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 PIWIL2Q8TC59 973 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 CSGALNACT1Q8TDX6 532 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ATP6V0A1Q93050 837 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 SNX27Q96L92 541 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 DHX36Q9H2U1 1008 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 LANCL2Q9NS86 450 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 TBC1D29Q9UFV1 150 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ST14Q9Y5Y6 855 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 FAM95CA0A1B0GW59 222 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 FAM234BA2RU67 622 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 KIAA0391O15091 583 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 HTRA2O43464 458 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 LY86O95711 162 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CKMP06732 381 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 MCM2P49736 904 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CASP5P51878 434 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ATP8B2P98198 1209 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 SLC6A3Q01959 620 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 AKAP17AQ02040 695 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 ANKRD34AQ69YU3 496 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 MFSD6Q6ZSS7 791 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CXorf67Q86X51 503 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 NGEFQ8N5V2 710 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 SETD6Q8TBK2 473 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 THRSPQ92748 146 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 NELL1Q92832 810 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 PCDHAC1Q9H158 963 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 C19orf53Q9UNZ5 99 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 ACTL7AQ9Y615 435 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ANKRD50Q9ULJ7 1429 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 INSRP06213 1382 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 C7orf72A4D263 438 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SIGLEC6O43699 453 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 HSF2BPO75031 334 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 HK3P52790 923 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 EVCP57679 992 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GALNT1Q10472 559 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 CHRNA2Q15822 529 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 C3orf38Q5JPI3 329 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 FYB2Q5VWT5 728 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 CEP128Q6ZU80 1094 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SYDE1Q6ZW31 735 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 METTL23Q86XA0 190 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 NRSN1Q8IZ57 195 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 CNTROBQ8N137 903 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 FSTL5Q8N475 847 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 LSMEM1Q8N8F7 131 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 APPL2Q8NEU8 664 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 RAB3IPQ96QF0 476 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 PRR13Q9NZ81 148 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GIMAP2Q9UG22 337 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 LYVE1Q9Y5Y7 322 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ARHGAP5Q13017 1502 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 USP19O94966 1318 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ANKRD30AQ9BXX3 1397 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 A6NNZ2 444 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 POTEB2H3BUK9 544 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 RAB27BO00194 218 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TRAF5O00463 557 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 PRPF4O43172 522 aaKnown RBP eCLIP2.98□□□□□ -1.93
CHD1-201ENST00000284049 BEST1O76090 585 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SERPINA4P29622 427 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GMFBP60983 142 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 AIMP1Q12904 312 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 SEC23AQ15436 765 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 KHDC1Q4VXA5 237 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 ANGEL2Q5VTE6 544 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 MCTP2Q6DN12 878 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SV2AQ7L0J3 742 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 RBM12BQ8IXT5 1001 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 FRMD1Q8N878 549 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 FBXO18Q8NFZ0 1043 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 OR6Y1Q8NGX8 325 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 HMGB4Q8WW32 186 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SNX21Q969T3 373 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 RILPL2Q969X0 211 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TREX2Q9BQ50 279 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 TEX12Q9BXU0 123 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms