RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TRIM60Q495X7 471 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 ENOSF1Q7L5Y1 443 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 KBTBD7Q8WVZ9 684 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 CTNNBL1Q8WYA6 563 aaPredicted RBP12.48□□□□□ -0.41
SSRP1-201ENST00000278412 CTTNBP2NLQ9P2B4 639 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 CHD9Q3L8U1 2897 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 ANO9A1A5B4 782 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 DNM1LO00429 736 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 PIRO00625 290 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 GPR182O15218 404 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 TACC1O75410 805 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 CABYRO75952 493 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 PSMC1P62191 440 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 ELF2Q15723 593 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 XKR4Q5GH76 650 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 DAAM2Q86T65 1068 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 RPAINQ86UA6 219 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 OSTM1Q86WC4 334 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 NOA1Q8NC60 698 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 DBF4BQ8NFT6 615 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 PIWIL1Q96J94 861 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 TSGA10Q9BZW7 698 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 PLEKHA5Q9HAU0 1116 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 L1RE1Q9UN81 338 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 PCDHGC5Q9Y5F6 944 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 PDE4DIPQ5VU43 2346 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 RTN2O75298 545 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 CYP1A1P04798 512 aaPredicted RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 TMEM253P0C7T8 217 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 PBX3P40426 434 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 TNNC1P63316 161 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF280BQ86YH2 543 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 KRT35Q92764 455 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 HEXIM2Q96MH2 286 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 NUP85Q9BW27 656 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 ANKRD62A6NC57 917 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 CCDC172P0C7W6 258 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 HSPA8P11142 646 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 KCNE1P15382 129 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 TCF4P15884 667 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 ITGB8P26012 769 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 LILRA4P59901 499 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 MESDQ14696 234 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 KIAA0319Q5VV43 1072 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 LRRC8DQ7L1W4 858 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 MCOLN2Q8IZK6 566 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 BEST2Q8NFU1 509 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 WNT8AQ9H1J5 351 aa12.47□□□□□ -0.41
SSRP1-201ENST00000278412 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
SSRP1-201ENST00000278412 CCDC130P13994 396 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 TLE2Q04725 743 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 PTP4A2Q12974 167 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF211Q13398 564 aaPredicted RBP12.46□□□□□ -0.41
SSRP1-201ENST00000278412 FAM26DQ5JW98 314 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 CLLU1OSQ5K130 101 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 MON1BQ7L1V2 547 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 OR6B3Q8NGW1 331 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 RFFLQ8WZ73 363 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 CDC23Q9UJX2 597 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 UBQLN1Q9UMX0 589 aaKnown RBP12.46□□□□□ -0.41
SSRP1-201ENST00000278412 TTC3P53804 2025 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 REV3LO60673 3130 aa12.46□□□□□ -0.41
SSRP1-201ENST00000278412 A0A0U1RQF3 1178 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 KPNA7A9QM74 516 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 SLU7O95391 586 aaKnown RBP12.46□□□□□ -0.42
SSRP1-201ENST00000278412 CD4P01730 458 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 BRCC3P46736 316 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 RGS7P49802 495 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 PRMT2P55345 433 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 ARHGEF6Q15052 776 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 RAB6CQ53S08 254 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 PPP1R26Q5T8A7 1209 aaPredicted RBP12.46□□□□□ -0.42
SSRP1-201ENST00000278412 DCAF12L1Q5VU92 463 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 PAPD7Q5XG87 772 aaKnown RBP12.46□□□□□ -0.42
SSRP1-201ENST00000278412 WSCD1Q658N2 575 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 ZNF333Q96JL9 665 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 CPXM1Q96SM3 734 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 OSBPL9Q96SU4 736 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 RAB6CQ9H0N0 254 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 SNX12Q9UMY4 172 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 SAR1BQ9Y6B6 198 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 NCANO14594 1321 aa12.46□□□□□ -0.42
SSRP1-201ENST00000278412 TDRD15B5MCY1 1934 aaKnown RBP12.45□□□□□ -0.42
SSRP1-201ENST00000278412 CLDN5O00501 218 aa12.45□□□□□ -0.42
SSRP1-201ENST00000278412 TLR3O15455 904 aaKnown RBP12.45□□□□□ -0.42
SSRP1-201ENST00000278412 BCAR1P56945 870 aa12.45□□□□□ -0.42
SSRP1-201ENST00000278412 PTPN11Q06124 597 aaPredicted RBP12.45□□□□□ -0.42
SSRP1-201ENST00000278412 C2orf54Q08AI8 447 aa12.45□□□□□ -0.42
SSRP1-201ENST00000278412 FAAP100Q0VG06 881 aa12.45□□□□□ -0.42
SSRP1-201ENST00000278412 PTPN20Q4JDL3 420 aa12.45□□□□□ -0.42
SSRP1-201ENST00000278412 ADAT2Q7Z6V5 191 aaKnown RBP12.45□□□□□ -0.42
SSRP1-201ENST00000278412 ECHDC2Q86YB7 292 aa12.45□□□□□ -0.42
SSRP1-201ENST00000278412 CREG2Q8IUH2 290 aa12.45□□□□□ -0.42
SSRP1-201ENST00000278412 ALG3Q92685 438 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms