RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 AXDND1Q5T1B0 1012 aaPredicted RBP13.4□□□□□ -0.26
MRPS28-201ENST00000276585 SLC39A4Q6P5W5 647 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 ZPBP2Q6X784 338 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 TMEM130Q8N3G9 435 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 FAM200AQ8TCP9 573 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 CSGALNACT1Q8TDX6 532 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 SLC32A1Q9H598 525 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 CACNA2D2Q9NY47 1150 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 SCN1AP35498 2009 aa13.4□□□□□ -0.26
MRPS28-201ENST00000276585 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■■ 129.3
MRPS28-201ENST00000276585 SMIM28A0A1B0GU29 152 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 LNP1A1A4G5 178 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 TMEM189-UBE2V1I3L0A0 370 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 ZNF263O14978 683 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 TADA2AO75478 443 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 TOM1L1O75674 476 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 PIGRP01833 764 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 RHOP08100 348 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 POU2F2P09086 479 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 KCNE1P15382 129 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 PSMC3P17980 439 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 CLCNKBP51801 687 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 KPNA1P52294 538 aaPredicted RBP13.39□□□□□ -0.27
MRPS28-201ENST00000276585 MCL1Q07820 350 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 NOLC1Q14978 699 aaKnown RBP eCLIP13.39□□□□□ -0.27
MRPS28-201ENST00000276585 ELF2Q15723 593 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 PSMD5Q16401 504 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 SLC5A9Q2M3M2 681 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 SEZ6Q53EL9 994 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 FAM78AQ5JUQ0 283 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 DGKKQ5KSL6 1271 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 HAUS6Q7Z4H7 955 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 CEP57Q86XR8 500 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 LURAP1LQ8IV03 231 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 CLSTN3Q9BQT9 956 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
MRPS28-201ENST00000276585 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 LARSQ9P2J5 1176 aaKnown RBP13.39□□□□□ -0.27
MRPS28-201ENST00000276585 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
MRPS28-201ENST00000276585 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
MRPS28-201ENST00000276585 PPP1R37O75864 691 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 PRB1P04280 392 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 HARSP12081 509 aaKnown RBP13.38□□□□□ -0.27
MRPS28-201ENST00000276585 RDXP35241 583 aaKnown RBP13.38□□□□□ -0.27
MRPS28-201ENST00000276585 DDIT3P35638 169 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 SMTNP53814 917 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 SCAPQ12770 1279 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 STRN3Q13033 797 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 UPP1Q16831 310 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 SLC10A6Q3KNW5 377 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 PLK5Q496M5 336 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 VITQ6UXI7 678 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 LNX1Q8TBB1 728 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-201ENST00000276585 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-201ENST00000276585 DNAJC19Q96DA6 116 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 MSANTD3Q96H12 275 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 ZC3H10Q96K80 434 aaKnown RBP13.38□□□□□ -0.27
MRPS28-201ENST00000276585 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-201ENST00000276585 IKZF4Q9H2S9 585 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
MRPS28-201ENST00000276585 MYMKA6NI61 221 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 SLC38A8A6NNN8 435 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 K7ENM7 598 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 KHNYNO15037 678 aaKnown RBP13.37□□□□□ -0.27
MRPS28-201ENST00000276585 ADAM12O43184 909 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 EXTL3O43909 919 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 AKAP3O75969 853 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 RHOBTB1O94844 696 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 FAM13AO94988 1023 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 CXCL8P10145 99 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 FGFR3P22607 806 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 NMT1P30419 496 aaKnown RBP13.37□□□□□ -0.27
MRPS28-201ENST00000276585 TNFSF9P41273 254 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 SOX9P48436 509 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 SIM1P81133 766 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-201ENST00000276585 GTF2BQ00403 316 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 APBB1IPQ7Z5R6 666 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-201ENST00000276585 MYCT1Q8N699 235 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
MRPS28-201ENST00000276585 RASSF8Q8NHQ8 419 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 DEPDC1BQ8WUY9 529 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 ST6GALNAC4Q9H4F1 302 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 TOPORSQ9NS56 1045 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-201ENST00000276585 TBX20Q9UMR3 447 aa13.37□□□□□ -0.27
MRPS28-201ENST00000276585 COL4A2P08572 1712 aa13.36□□□□□ -0.27
MRPS28-201ENST00000276585 ASXL3Q9C0F0 2248 aa13.36□□□□□ -0.27
MRPS28-201ENST00000276585 CCDC163A0A0D9SF12 145 aa13.36□□□□□ -0.27
MRPS28-201ENST00000276585 SPAARA0A1B0GVQ0 90 aa13.36□□□□□ -0.27
MRPS28-201ENST00000276585 TTC26A0AVF1 554 aa13.36□□□□□ -0.27
MRPS28-201ENST00000276585 TISP43B9A030 160 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms