RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 NDUFA8P51970 172 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 GPR17Q13304 367 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 BMT2Q1RMZ1 405 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 KIAA0895Q8NCT3 520 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 OXCT2Q9BYC2 517 aaPredicted RBP15.57■□□□□ 0.08
HMGN3-201ENST00000275036 MTMR12Q9C0I1 747 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 DNAJC25Q9H1X3 360 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 GOLPH3LQ9H4A5 285 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 SIX4Q9UIU6 781 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 UBE4BO95155 1302 aa15.57■□□□□ 0.08
HMGN3-201ENST00000275036 MTMR11A4FU01 709 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 KPNA7A9QM74 516 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 KIAA0391O15091 583 aaKnown RBP15.56■□□□□ 0.08
HMGN3-201ENST00000275036 STK4Q13043 487 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 MYBPC2Q14324 1141 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 WSCD1Q658N2 575 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 OR5B17Q8NGF7 314 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 ZSWIM3Q96MP5 696 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 LRRC3Q9BY71 257 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 SCAND2PQ9GZW5 306 aaPredicted RBP15.56■□□□□ 0.08
HMGN3-201ENST00000275036 TBC1D17Q9HA65 648 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 ARHGEF3Q9NR81 526 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 MAFFQ9ULX9 164 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 AGAP1Q9UPQ3 857 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 NCANO14594 1321 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 COL4A2P08572 1712 aa15.56■□□□□ 0.08
HMGN3-201ENST00000275036 ZNF233A6NK53 670 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 SOAT2O75908 522 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 PRR29P0C7W0 189 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 GJA1P17302 382 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 CYP2J2P51589 502 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 NUBP1P53384 320 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 DUSP4Q13115 394 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 BECN1Q14457 450 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 SV2CQ496J9 727 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 KMT5BQ4FZB7 885 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 TANGO2Q6ICL3 276 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 CENPPQ6IPU0 288 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 MTSS1LQ765P7 747 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 TMC8Q8IU68 726 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 CCDC105Q8IYK2 499 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 CSGALNACT2Q8N6G5 542 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 FSIP1Q8NA03 581 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 RDH13Q8NBN7 331 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 ATAD1Q8NBU5 361 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 CACTINQ8WUQ7 758 aaKnown RBP15.55■□□□□ 0.08
HMGN3-201ENST00000275036 ZNF560Q96MR9 790 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 GZF1Q9H116 711 aaPredicted RBP15.55■□□□□ 0.08
HMGN3-201ENST00000275036 INTS13Q9NVM9 706 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 ITGA11Q9UKX5 1188 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 SLC27A5Q9Y2P5 690 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 ATP6V1DQ9Y5K8 247 aa15.55■□□□□ 0.08
HMGN3-201ENST00000275036 A0A1W2PQ27 194 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 A0A1W2PQ64 194 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 A0A1W2PQD8 194 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 LRRN2O75325 713 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 TMEM191BP0C7N4 346 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 PNPLA4P41247 253 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 SYKP43405 635 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 EPHA5P54756 1037 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 SNRNP35Q16560 246 aaKnown RBP15.54■□□□□ 0.08
HMGN3-201ENST00000275036 KNOP1Q1ED39 458 aaKnown RBP15.54■□□□□ 0.08
HMGN3-201ENST00000275036 SLC39A12Q504Y0 691 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 FAM78AQ5JUQ0 283 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 PDZD4Q76G19 769 aaPredicted RBP15.54■□□□□ 0.08
HMGN3-201ENST00000275036 LRRTM3Q86VH5 581 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 LRRC52Q8N7C0 313 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 ATOH1Q92858 354 aaPredicted RBP15.54■□□□□ 0.08
HMGN3-201ENST00000275036 ZCWPW1Q9H0M4 648 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 EXOC1Q9NV70 894 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 GDE1Q9NZC3 331 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 DLGAP2Q9P1A6 1054 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 USP25Q9UHP3 1055 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 DSEQ9UL01 958 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 L1RE1Q9UN81 338 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 PTPRDP23468 1912 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 OBSL1O75147 1896 aa15.54■□□□□ 0.08
HMGN3-201ENST00000275036 SHISA7A6NL88 538 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 ECI2O75521 394 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 KRT19P08727 400 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 GLULP15104 373 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 SNRPFP62306 86 aaKnown RBP15.53■□□□□ 0.08
HMGN3-201ENST00000275036 BFSP1Q12934 665 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 SNW1Q13573 536 aaKnown RBP15.53■□□□□ 0.08
HMGN3-201ENST00000275036 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 METTL23Q86XA0 190 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 C12orf56Q8IXR9 622 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 XXYLT1Q8NBI6 393 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 SHKBP1Q8TBC3 707 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 ZNF512Q96ME7 567 aaPredicted RBP15.53■□□□□ 0.08
HMGN3-201ENST00000275036 FOXQ1Q9C009 403 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 KIAA1586Q9HCI6 787 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 ZNF334Q9HCZ1 680 aaPredicted RBP15.53■□□□□ 0.08
HMGN3-201ENST00000275036 ZNF638Q14966 1978 aaKnown RBP15.53■□□□□ 0.08
HMGN3-201ENST00000275036 GREB1Q4ZG55 1949 aa15.53■□□□□ 0.08
HMGN3-201ENST00000275036 HCRTO43612 131 aa15.52■□□□□ 0.08
HMGN3-201ENST00000275036 MICAL2O94851 1124 aa15.52■□□□□ 0.08
HMGN3-201ENST00000275036 RPN1P04843 607 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms