RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 HPDLQ96IR7 371 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 PBKQ96KB5 322 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.36■□□□□ 0.214e-9■■■■■ 32.8
COPS3-201ENST00000268717 OSGEPQ9NPF4 335 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 CTTNBP2NLQ9P2B4 639 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 UBQLN1Q9UMX0 589 aaKnown RBP16.36■□□□□ 0.21
COPS3-201ENST00000268717 NOC2LQ9Y3T9 749 aaKnown RBP16.36■□□□□ 0.21
COPS3-201ENST00000268717 THAP12O43422 761 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 BUB1BO60566 1050 aaPredicted RBP16.35■□□□□ 0.21
COPS3-201ENST00000268717 SRGAP2O75044 1071 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 SLC34A2O95436 690 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 TUBBP07437 444 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 CYP3A5P20815 502 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 CDH5P33151 784 aaPredicted RBP16.35■□□□□ 0.21
COPS3-201ENST00000268717 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
COPS3-201ENST00000268717 INCA1Q0VD86 236 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 PEX26Q7Z412 305 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 NT5DC3Q86UY8 548 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 PHF13Q86YI8 300 aaPredicted RBP16.35■□□□□ 0.21
COPS3-201ENST00000268717 MCOLN2Q8IZK6 566 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 CAGE1Q8TC20 777 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 ZNF606Q8WXB4 792 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 ZNF653Q96CK0 615 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 HES6Q96HZ4 224 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 SCLYQ96I15 445 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 PDCL3Q9H2J4 239 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 NXF3Q9H4D5 531 aaKnown RBP16.35■□□□□ 0.21
COPS3-201ENST00000268717 IL23AQ9NPF7 189 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 PUF60Q9UHX1 559 aaKnown RBP16.35■□□□□ 0.21
COPS3-201ENST00000268717 AMFRQ9UKV5 643 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 COG5Q9UP83 839 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 AGAP1Q9UPQ3 857 aa16.35■□□□□ 0.21
COPS3-201ENST00000268717 GPR182O15218 404 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 NCK2O43639 380 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 RPS6KA5O75582 802 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 ACRP10323 421 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 PAFAH1B1P43034 410 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 BFSP2Q13515 415 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 NAA30Q147X3 362 aaPredicted RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 CFAP221Q4G0U5 840 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 TMEM240Q5SV17 173 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 PSRC1Q6PGN9 363 aaPredicted RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 MON1BQ7L1V2 547 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 HACE1Q8IYU2 909 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 RPS6KC1Q96S38 1066 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 MMS19Q96T76 1030 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 TRAIPQ9BWF2 469 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 NXF1Q9UBU9 619 aaKnown RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.34■□□□□ 0.21
COPS3-201ENST00000268717 IPPQ9Y573 584 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 SQORQ9Y6N5 450 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 V9GYY5 206 aaPredicted RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 CITO14578 2027 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 MYH10P35580 1976 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 MIF4GDA9UHW6 222 aaKnown RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 MED7O43513 233 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 CILPO75339 1184 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 WEE2P0C1S8 567 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 ATF7P17544 494 aaPredicted RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 CD58P19256 250 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 TNNC1P63316 161 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 FAM26DQ5JW98 314 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 TEX35Q5T0J7 233 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 ZNF564Q8TBZ8 553 aaPredicted RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 COG1Q8WTW3 980 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 WNT8BQ93098 351 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 CYFIP2Q96F07 1278 aa16.34■□□□□ 0.21
COPS3-201ENST00000268717 ZMAT2Q96NC0 199 aaKnown RBP16.34■□□□□ 0.21
COPS3-201ENST00000268717 ZNF185O15231 689 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 CHRNA1P02708 482 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 PNPLA4P41247 253 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 LIN9Q5TKA1 542 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 NAA35Q5VZE5 725 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 TWF2Q6IBS0 349 aaKnown RBP16.33■□□□□ 0.2
COPS3-201ENST00000268717 GPR153Q6NV75 609 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 ZNF365Q70YC5 407 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 MTERF4Q7Z6M4 381 aaKnown RBP16.33■□□□□ 0.2
COPS3-201ENST00000268717 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 USP38Q8NB14 1042 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 MSANTD4Q8NCY6 345 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 SMG8Q8ND04 991 aaKnown RBP16.33■□□□□ 0.2
COPS3-201ENST00000268717 VWCEQ96DN2 955 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 CAPZA3Q96KX2 299 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 NUP85Q9BW27 656 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 LHX5Q9H2C1 402 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 CNOT8Q9UFF9 292 aaKnown RBP16.33■□□□□ 0.2
COPS3-201ENST00000268717 LCMT1Q9UIC8 334 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 KIAA1257Q9ULG3 409 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 BARX2Q9UMQ3 279 aaPredicted RBP16.33■□□□□ 0.2
COPS3-201ENST00000268717 POLIQ9UNA4 740 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 ST3GAL5Q9UNP4 418 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 CEP83Q9Y592 693 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 TRIP11Q15643 1979 aa16.33■□□□□ 0.2
COPS3-201ENST00000268717 SMIM28A0A1B0GU29 152 aa16.32■□□□□ 0.2
COPS3-201ENST00000268717 PDE2AO00408 941 aaPredicted RBP16.32■□□□□ 0.2
COPS3-201ENST00000268717 RFC2P35250 354 aa16.32■□□□□ 0.2
COPS3-201ENST00000268717 CLUL1Q15846 466 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms