RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ATP2A1O14983 1001 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 OAZ1P54368 228 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 MTFR1Q15390 333 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 NFIL3Q16649 462 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 GJC2Q5T442 439 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 APBB1IPQ7Z5R6 666 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CYP4X1Q8N118 509 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TTC8Q8TAM2 541 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 IFT43Q96FT9 208 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 VCXQ9H320 206 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ACP6Q9NPH0 428 aa16.88■□□□□ 0.29
MAP1LC3B-201ENST00000268607 KIAA1217Q5T5P2 1943 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ZSCAN9O15535 394 aaPredicted RBP16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ZNF862O60290 1169 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 FDX1P10109 184 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ACADSP16219 412 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TNFAIP3P21580 790 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 VAMP7P51809 220 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 PARP6Q2NL67 630 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SWSAP1Q6NVH7 229 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 RIOX2Q8IUF8 465 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ARHGEF19Q8IW93 802 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ASAP3Q8TDY4 903 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 LRMDAQ9H2I8 198 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 AAASQ9NRG9 546 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 UBE4BO95155 1302 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 IMPDH2P12268 514 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CCND2P30279 289 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 FOXN2P32314 431 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CHKAP35790 457 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 COILP38432 576 aaPredicted RBP16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 GHRHRQ02643 423 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CLUL1Q15846 466 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 LY6KQ17RY6 165 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TSNAXIP1Q2TAA8 658 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 MUM1Q2TAK8 710 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SPRYD7Q5W111 196 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TRMT10CQ7L0Y3 403 aaKnown RBP16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CBWD2Q8IUF1 395 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 C4orf19Q8IY42 314 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 UBL4BQ8N7F7 174 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 BSNDQ8WZ55 320 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 MAGEB18Q96M61 343 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CTTNBP2NLQ9P2B4 639 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CPA4Q9UI42 421 aa16.87■□□□□ 0.29
MAP1LC3B-201ENST00000268607 E7ENQ6 273 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ADRB2P07550 413 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 PYGMP11217 842 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 OSBPP22059 807 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ATP5DP30049 168 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CCDC15Q0P6D6 951 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CALCOCO2Q13137 446 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ZNF568Q3ZCX4 644 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SRRM1Q8IYB3 904 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 XXYLT1Q8NBI6 393 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 LMO3Q8TAP4 145 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SLC20A1Q8WUM9 679 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 FAM136AQ96C01 138 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TMEM206Q9H813 350 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 DOCK3Q8IZD9 2030 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ANKRD62A6NC57 917 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ENTPD5O75356 428 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 HSPA6P17066 643 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TAC1P20366 129 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 EPHB2P29323 1055 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ADSSP30520 456 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ACVR2BQ13705 512 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 KYNUQ16719 465 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 C1orf220Q5T0J3 134 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ZNF449Q6P9G9 518 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ZSWIM1Q9BR11 485 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SYT11Q9BT88 431 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 PDGFCQ9NRA1 345 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 PCDHA10Q9Y5I2 948 aa16.86■□□□□ 0.29
MAP1LC3B-201ENST00000268607 NPTX2P47972 431 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SESN3P58005 492 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SETDB1Q15047 1291 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 C1QTNF12Q5T7M4 302 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SEL1L2Q5TEA6 688 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CCNJLQ8IV13 435 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SLC9A9Q8IVB4 645 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 FBXO16Q8IX29 292 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 COPS5Q92905 334 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 PLEKHG4BQ96PX9 1271 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TBC1D10AQ9BXI6 508 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 SCOCQ9UIL1 159 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CHKBQ9Y259 395 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 DENND3A2RUS2 1198 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 TP73O15350 636 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CETPP11597 493 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 GTF2BQ00403 316 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 KRT76Q01546 638 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 DYNC1I2Q13409 638 aaKnown RBP16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 MESDQ14696 234 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 ZNF746Q6NUN9 644 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 CPNE8Q86YQ8 564 aa16.85■□□□□ 0.29
MAP1LC3B-201ENST00000268607 AGGF1Q8N302 714 aaeCLIP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms