RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 OASLQ15646 514 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 ZNF699Q32M78 642 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 CNPY1Q3B7I2 92 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 LRRC49Q8IUZ0 686 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 YIPF2Q9BWQ6 316 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 RBMX2Q9Y388 322 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 PNPLA7Q6ZV29 1317 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 APOL1O14791 398 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 ZBTB24O43167 697 aaPredicted RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 RASSF9O75901 435 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 FAM58BPP0C7Q3 252 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 TMEM270Q6UE05 265 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 C16orf89Q6UX73 402 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 FOXP4Q8IVH2 680 aaPredicted RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 CDKL3Q8IVW4 592 aaPredicted RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 C7orf25Q9BPX7 421 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 AMACRQ9UHK6 382 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 STOML2Q9UJZ1 356 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 H7C1W4 665 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 TRIM49P0CI25 452 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 TRIM49CP0CI26 452 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 EXOSC10Q01780 885 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 EDRF1Q3B7T1 1238 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 RNF19BQ6ZMZ0 732 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 KCTD1Q719H9 257 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 NDUFAF2Q8N183 169 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 DDX47Q9H0S4 455 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 MOV10Q9HCE1 1003 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 METTL5Q9NRN9 209 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 KLHL8Q9P2G9 620 aaPredicted RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 SHROOM3Q8TF72 1996 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 CLTCQ00610 1675 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 SNX2O60749 519 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 PTPN4P29074 926 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 IL12RB1P42701 662 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 SGSM1Q2NKQ1 1148 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 IZUMO3Q5VZ72 239 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 C4orf50Q6ZRC1 276 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 AKAP14Q86UN6 197 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 PCIF1Q9H4Z3 704 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 C16orf96A6NNT2 1141 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 CCNCP24863 283 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 TNFAIP2Q03169 654 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 INPP5AQ14642 412 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 KCTD2Q14681 263 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 SDE2Q6IQ49 451 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 SAPCD2Q86UD0 394 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 ACMSDQ8TDX5 336 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 GPBP1L1Q9HC44 474 aaPredicted RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 UBN1Q9NPG3 1134 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 HAO1Q9UJM8 370 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 COQ6Q9Y2Z9 468 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 SYNJ2BP-COX16A0A087WUM0 186 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 KIAA0391O15091 583 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 SCNN1DP51172 638 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 DLG4P78352 724 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ZNF667Q5HYK9 610 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 SHC4Q6S5L8 630 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 PPM1NQ8N819 430 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 COX16Q9P0S2 106 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TUBGCP4Q9UGJ1 667 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 AKT3Q9Y243 479 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 AXIN1O15169 862 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 MYCLP1P12525 358 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 CIITAP33076 1130 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ADAM17P78536 824 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 KDSRQ06136 332 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 SLC12A1Q13621 1099 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 PUS10Q3MIT2 529 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 MDM1Q8TC05 714 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 C1orf50Q9BV19 199 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TRIM62Q9BVG3 475 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 EBF2Q9HAK2 575 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NMRK1Q9NWW6 199 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 FAM53CQ9NYF3 392 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NXF1Q9UBU9 619 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 PNPLA6Q8IY17 1366 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TMEM120BA0PK00 339 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ZSCAN9O15535 394 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 B3GALNT1O75752 331 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 KRT16P08779 473 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 PSMC3P17980 439 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ABCE1P61221 599 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 SEPT1Q8WYJ6 367 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TIPINQ9BVW5 301 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TRIM9Q9C026 710 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ENO1P06733 434 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 ATF4P18848 351 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 CCR3P51677 355 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 AP3M2P53677 418 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NCAPHQ15003 741 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 RCOR2Q8IZ40 523 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ZCCHC7Q8N3Z6 543 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 ZBTB1Q9Y2K1 713 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 SRGNP10124 158 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 XPAP23025 273 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 CRKLP46109 303 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 CACNB1Q02641 598 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 LLGL1Q15334 1064 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ITPRIPL1Q6GPH6 555 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms