RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 ZACNQ401N2 412 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 SV2AQ7L0J3 742 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 FAM186BQ8IYM0 893 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 THEM5Q8N1Q8 247 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 TOP6BLQ8N6T0 577 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 ATAD1Q8NBU5 361 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 DHTKD1Q96HY7 919 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 PGLYRP2Q96PD5 576 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 CLSTN2Q9H4D0 955 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 PIDD1Q9HB75 910 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 DNMT3BQ9UBC3 853 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 MAFFQ9ULX9 164 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 R3HCC1Q9Y3T6 440 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 BRWD1Q9NSI6 2320 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 MTMR11A4FU01 709 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 PRRG1O14668 218 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 CETN3O15182 167 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 HCRTO43612 131 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 N4BP1O75113 896 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 PHACTR2O75167 634 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 STAU1O95793 577 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 CDR1P51861 262 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 NTHL1P78549 312 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 FKBP3Q00688 224 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 ENPEPQ07075 957 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 PPP3CAQ08209 521 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 BIRC3Q13489 604 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 TRPC3Q13507 836 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 INTS8Q75QN2 995 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 DPH6Q7L8W6 267 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 GRASPQ7Z6J2 395 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 RNF135Q8IUD6 432 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 TMEM86AQ8N2M4 240 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 KBTBD7Q8WVZ9 684 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 ELMO3Q96BJ8 720 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 GBP4Q96PP9 640 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 TSG101Q99816 390 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 DUSP9Q99956 384 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 MKNK1Q9BUB5 465 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 TMLHEQ9NVH6 421 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 HCFC1R1Q9NWW0 138 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 DDX43Q9NXZ2 648 aaKnown RBP9.05□□□□□ -0.96
ERCC8-201ENST00000265038 INSL5Q9Y5Q6 135 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 CLUHO75153 1309 aa9.05□□□□□ -0.96
ERCC8-201ENST00000265038 TRIP11Q15643 1979 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 PSMA7O14818 248 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 XYLBO75191 536 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 TRIM49P0CI25 452 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 TRIM49CP0CI26 452 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 ACAT1P24752 427 aaKnown RBP9.04□□□□□ -0.96
ERCC8-201ENST00000265038 LMO2P25791 158 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 ATICP31939 592 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 PPP1R2P41236 205 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 GCLMP48507 274 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 LRRC63Q05C16 580 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 DUSP4Q13115 394 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 STIM1Q13586 685 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 NCOA4Q13772 614 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 WDR72Q3MJ13 1102 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 SLC39A12Q504Y0 691 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 KLHL10Q6JEL2 608 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 TTI2Q6NXR4 508 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 ADGRF2Q8IZF7 708 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 TTC9BQ8N6N2 239 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 TRIML1Q8N9V2 468 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 SPATA18Q8TC71 538 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 NELFBQ8WX92 580 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 MMS19Q96T76 1030 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 PKMYT1Q99640 499 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 ACBD6Q9BR61 282 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 MRPL45Q9BRJ2 306 aaKnown RBP9.04□□□□□ -0.96
ERCC8-201ENST00000265038 VRTNQ9H8Y1 702 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 CEP72Q9P209 647 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 POLIQ9UNA4 740 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 SLC27A5Q9Y2P5 690 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 NR2E1Q9Y466 385 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 NME7Q9Y5B8 376 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 VWA8A3KMH1 1905 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 VCANP13611 3396 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 CITO14578 2027 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 LRG1P02750 347 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 FAM163BP0C2L3 166 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 EPB41P11171 864 aaKnown RBP9.04□□□□□ -0.96
ERCC8-201ENST00000265038 KRT13P13646 458 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 WARSP23381 471 aaKnown RBP9.04□□□□□ -0.96
ERCC8-201ENST00000265038 LHX1P48742 406 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 TWF1Q12792 350 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 ZDHHC14Q8IZN3 488 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 GPT2Q8TD30 523 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 SYAP1Q96A49 352 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-201ENST00000265038 MYADMQ96S97 322 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 EPHX3Q9H6B9 360 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 YIPF1Q9Y548 306 aa9.04□□□□□ -0.96
ERCC8-201ENST00000265038 PI4K2BG5E9Z4 385 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 SLC16A3O15427 465 aaKnown RBP9.03□□□□□ -0.96
ERCC8-201ENST00000265038 LRRN2O75325 713 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 TACC1O75410 805 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 SOAT2O75908 522 aa9.03□□□□□ -0.96
ERCC8-201ENST00000265038 HLA-DRAP01903 254 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms