RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NSL1Q96IY1 281 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 PRPF18Q99633 342 aaKnown RBP18.8■□□□□ 0.6
COL5A3-201ENST00000264828 OLFML3Q9NRN5 406 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 CYTH3O43739 400 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 STK4Q13043 487 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 FUT11Q495W5 492 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 RHBDL2Q9NX52 303 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 PIK3C2BO00750 1634 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 CHRNA5P30532 468 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 AVPR1AP37288 418 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 STAT5BP51692 787 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 SPATA18Q8TC71 538 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 FAM84BQ96KN1 310 aaPredicted RBP18.79■□□□□ 0.6
COL5A3-201ENST00000264828 TRIM62Q9BVG3 475 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.79■□□□□ 0.6
COL5A3-201ENST00000264828 FOXP2O15409 715 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 ETFBP38117 255 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 CLK1P49759 484 aaKnown RBP18.79■□□□□ 0.6
COL5A3-201ENST00000264828 PTGISQ16647 500 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 FAM71DQ8N9W8 422 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 PI4K2AQ9BTU6 479 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 BLOC1S6Q9UL45 172 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 KRT75O95678 551 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 EFNA5P52803 228 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 EXOSC10Q01780 885 aaKnown RBP18.79■□□□□ 0.6
COL5A3-201ENST00000264828 PWP1Q13610 501 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 TMEM132DQ14C87 1099 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 CNDP1Q96KN2 507 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 CAAP1Q9H8G2 361 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 IRX1P78414 480 aaPredicted RBP18.79■□□□□ 0.6
COL5A3-201ENST00000264828 CCDC15Q0P6D6 951 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 PDIA5Q14554 519 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 PLA2G4FQ68DD2 849 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 E2F7Q96AV8 911 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 MUC3BQ9H195 1237 aa18.79■□□□□ 0.6
COL5A3-201ENST00000264828 METTL5Q9NRN9 209 aaKnown RBP18.79■□□□□ 0.6
COL5A3-201ENST00000264828 NBPF26B4DH59 902 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 PSMD3O43242 534 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 GTF2H3Q13889 308 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 PLEKHA8Q96JA3 519 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 OSBPL8Q9BZF1 889 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 SSU72P8A0A1W2PR75 194 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 LZTS3O60299 673 aaPredicted RBP18.78■□□□□ 0.6
COL5A3-201ENST00000264828 TMED10P49755 219 aaKnown RBP18.78■□□□□ 0.6
COL5A3-201ENST00000264828 IRAK1P51617 712 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 KCNK10P57789 538 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 VEPH1Q14D04 833 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 BATF3Q9NR55 127 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 H2AFY2Q9P0M6 372 aaPredicted RBP18.78■□□□□ 0.6
COL5A3-201ENST00000264828 DIP2CQ9Y2E4 1556 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 NFIBO00712 420 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 GYPCP04921 128 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 SNRPAP09012 282 aaKnown RBP18.78■□□□□ 0.6
COL5A3-201ENST00000264828 RUNX1T1Q06455 604 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 SLC29A2Q14542 456 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 CLEC10AQ8IUN9 316 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 USP38Q8NB14 1042 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 OR6J1Q8NGC5 347 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 AGBL1Q96MI9 1066 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 SYTL2Q9HCH5 934 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 DNAJC3Q13217 504 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 LMTK2Q8IWU2 1503 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 RHOBTB3O94955 611 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 MTMR2Q13614 643 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 ANGPT1Q15389 498 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 FAM180AQ6UWF9 173 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 SLC7A14Q8TBB6 771 aa18.78■□□□□ 0.6
COL5A3-201ENST00000264828 DDX5P17844 614 aaKnown RBP18.77■□□□□ 0.6
COL5A3-201ENST00000264828 SPRP35270 261 aaPredicted RBP18.77■□□□□ 0.6
COL5A3-201ENST00000264828 KYAT1Q16773 422 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 CCDC60Q8IWA6 550 aaPredicted RBP18.77■□□□□ 0.6
COL5A3-201ENST00000264828 MAP3K20Q9NYL2 800 aaKnown RBP18.77■□□□□ 0.6
COL5A3-201ENST00000264828 PAIP2BQ9ULR5 123 aaKnown RBP18.77■□□□□ 0.6
COL5A3-201ENST00000264828 RARBP10826 455 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 NUDT2P50583 147 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 RIN3Q8TB24 985 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 SCN3BQ9NY72 215 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 JCADQ9P266 1359 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 GSNP06396 782 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 NEDD1Q8NHV4 660 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 KCNB2Q92953 911 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 HES6Q96HZ4 224 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 ISCUQ9H1K1 167 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 SLC39A10Q9ULF5 831 aa18.77■□□□□ 0.6
COL5A3-201ENST00000264828 COPG1Q9Y678 874 aaKnown RBP18.77■□□□□ 0.6
COL5A3-201ENST00000264828 PSMD14O00487 310 aa18.77■□□□□ 0.59
COL5A3-201ENST00000264828 RBP5P82980 135 aa18.77■□□□□ 0.59
COL5A3-201ENST00000264828 PLIN5Q00G26 463 aa18.77■□□□□ 0.59
COL5A3-201ENST00000264828 CYLC2Q14093 348 aaPredicted RBP18.77■□□□□ 0.59
COL5A3-201ENST00000264828 C11orf96Q7Z7L8 435 aa18.77■□□□□ 0.59
COL5A3-201ENST00000264828 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.59
COL5A3-201ENST00000264828 BBS2Q9BXC9 721 aa18.77■□□□□ 0.59
COL5A3-201ENST00000264828 NOD2Q9HC29 1040 aa18.77■□□□□ 0.59
COL5A3-201ENST00000264828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.76■□□□□ 0.59
COL5A3-201ENST00000264828 AP3B1O00203 1094 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms