RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 KLRG2A4D1S0 409 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 PSTPIP1O43586 416 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 TROVE2P10155 538 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 MAPTP10636 758 aaKnown RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 CD19P15391 556 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 NOMO3P69849 1222 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 MAPK6Q16659 721 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 HIF1AQ16665 826 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 GNPTABQ3T906 1256 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 C3orf62Q6ZUJ4 267 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 C4orf19Q8IY42 314 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF75CPQ92670 426 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 MCUR1Q96AQ8 359 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 RNPEPL1Q9HAU8 725 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 APOBEC3GQ9HC16 384 aaKnown RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 FBXO6Q9NRD1 293 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 SLC17A7Q9P2U7 560 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 CHMP2BQ9UQN3 213 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 MYH9P35579 1960 aaKnown RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 SLX4Q8IY92 1834 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF862O60290 1169 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 EDF1O60869 148 aaKnown RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 MAP3K6O95382 1288 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 KLRC2P26717 231 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 ABL2P42684 1182 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 BPIFB4P59827 614 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 OSTNP61366 133 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 GCNT1Q02742 428 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 CUL2Q13617 745 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 SMAD1Q15797 465 aaKnown RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 ANKRD22Q5VYY1 191 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 LRRC6Q86X45 466 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 VPS52Q8N1B4 723 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 OR5B17Q8NGF7 314 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 TCP10LQ8TDR4 215 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 SLITRK1Q96PX8 696 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 TARS2Q9BW92 718 aaKnown RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 AVENQ9NQS1 362 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 COQ4Q9Y3A0 265 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 IKBKGQ9Y6K9 419 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 PIK3R2O00459 728 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 PEX11AO75192 247 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 CCNB1P14635 433 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 CTCFP49711 727 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 BAATQ14032 418 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 CTAGE3PQ8IX95 158 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 EXD1Q8NHP7 514 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 TMC2Q8TDI7 906 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 RSAD2Q8WXG1 361 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 MFSD14AQ96MC6 490 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 IMPG2Q9BZV3 1241 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 DENND2DQ9H6A0 471 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 PSMC3IPQ9P2W1 217 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-201ENST00000263856 STARD13Q9Y3M8 1113 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 NUB1Q9Y5A7 615 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 UBIAD1Q9Y5Z9 338 aa13.06□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF536O15090 1300 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 CCDC195A0A1B0GUA6 201 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 KITP10721 976 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 CALB2P22676 271 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 GDF10P55107 478 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 MXRA7P84157 204 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 PDK4Q16654 411 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 SPOCD1Q6ZMY3 1216 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 ABRAQ8N0Z2 381 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 AGGF1Q8N302 714 aaeCLIP13.05□□□□□ -0.328e-6■□□□□ 11.2
CHMP3-201ENST00000263856 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 LRRN4Q8WUT4 740 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 PRR11Q96HE9 360 aaPredicted RBP13.05□□□□□ -0.32
CHMP3-201ENST00000263856 MSTO1Q9BUK6 570 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 BATF3Q9NR55 127 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 PARVAQ9NVD7 372 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 ARMCX1Q9P291 453 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 HEY2Q9UBP5 337 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 PCDHA10Q9Y5I2 948 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 SCINQ9Y6U3 715 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 WEE2P0C1S8 567 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 PTDSS1P48651 473 aaKnown RBP13.05□□□□□ -0.32
CHMP3-201ENST00000263856 RASSF2P50749 326 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 HSD17B4P51659 736 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 YWHAGP61981 247 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHMP3-201ENST00000263856 LMNB2Q03252 620 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 RCN2Q14257 317 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 LMNTD2Q8IXW0 634 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 FBXO36Q8NEA4 188 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 DEPTORQ8TB45 409 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
CHMP3-201ENST00000263856 PAFAH2Q99487 392 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 SYNCQ9H7C4 482 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 CYP39A1Q9NYL5 469 aa13.05□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms