RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 MIIPQ5JXC2 388 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 EP400NLQ6ZTU2 488 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 SPATA31D4Q6ZUB0 917 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 ADGRF2Q8IZF7 708 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 OR10T2Q8NGX3 314 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 MAFAQ8NHW3 353 aaPredicted RBP19.66■□□□□ 0.74
SDF4-201ENST00000263741 TUBGCP2Q9BSJ2 902 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 CRACR2AQ9BSW2 395 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 SDCBP2Q9H190 292 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 RAB20Q9NX57 234 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 DOCK6Q96HP0 2047 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 MYH10P35580 1976 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 C2orf16Q68DN1 1984 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 PES1O00541 588 aaKnown RBP19.66■□□□□ 0.74
SDF4-201ENST00000263741 EPCAMP16422 314 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 TYMPP19971 482 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 ACAT1P24752 427 aaKnown RBP19.66■□□□□ 0.74
SDF4-201ENST00000263741 KLRC2P26717 231 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 ATICP31939 592 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 OR1D2P34982 312 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 MRPL58Q14197 206 aaKnown RBP19.66■□□□□ 0.74
SDF4-201ENST00000263741 KRT31Q15323 416 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 MAN2A1Q16706 1144 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 SGSM1Q2NKQ1 1148 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 ZNF280DQ6N043 979 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 KBTBD7Q8WVZ9 684 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 EMILIN2Q9BXX0 1053 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 RXFP1Q9HBX9 757 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 NME7Q9Y5B8 376 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 GLP2RO95838 553 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 CYP11A1P05108 521 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 NDUFV1P49821 464 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 ARID3AQ99856 593 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 IMPG2Q9BZV3 1241 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 SSX2IPQ9Y2D8 614 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 HCFC2Q9Y5Z7 792 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 PTPRDP23468 1912 aa19.65■□□□□ 0.74
SDF4-201ENST00000263741 STAU1O95793 577 aaKnown RBP19.64■□□□□ 0.74
SDF4-201ENST00000263741 ZNF18P17022 549 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 EEF1GP26641 437 aaKnown RBP19.64■□□□□ 0.74
SDF4-201ENST00000263741 ASPAP45381 313 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 TOP6BLQ8N6T0 577 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 TATDN2Q93075 761 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 VPS16Q9H269 839 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 VRTNQ9H8Y1 702 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 STXBP5LQ9Y2K9 1186 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 COQ4Q9Y3A0 265 aa19.64■□□□□ 0.74
SDF4-201ENST00000263741 BECN2A8MW95 431 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 TBC1D4O60343 1298 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 OAZ2O95190 189 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 ADH1AP07327 375 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 WEE2P0C1S8 567 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 ROR1Q01973 937 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 APBA1Q02410 837 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 METTL23Q86XA0 190 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 PPP2R3CQ969Q6 453 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 PGLYRP2Q96PD5 576 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 PRDM6Q9NQX0 595 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.64■□□□□ 0.73
SDF4-201ENST00000263741 DDX43Q9NXZ2 648 aaKnown RBP19.64■□□□□ 0.73
SDF4-201ENST00000263741 CLDND1Q9NY35 253 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 GCNT4Q9P109 453 aa19.64■□□□□ 0.73
SDF4-201ENST00000263741 BARX2Q9UMQ3 279 aaPredicted RBP19.64■□□□□ 0.73
SDF4-201ENST00000263741 UNC80Q8N2C7 3258 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 WDR27A2RRH5 827 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 N4BP1O75113 896 aaKnown RBP19.63■□□□□ 0.73
SDF4-201ENST00000263741 CPB1P15086 417 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 CLCN4P51793 760 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 DLX2Q07687 328 aaPredicted RBP19.63■□□□□ 0.73
SDF4-201ENST00000263741 ORC1Q13415 861 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 VWA3BQ502W6 1294 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 FEZF2Q8TBJ5 459 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 NDST4Q9H3R1 872 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 FNIP2Q9P278 1114 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 HMGXB4Q9UGU5 601 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 DSEQ9UL01 958 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 BACE2Q9Y5Z0 518 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 H7C4K7 107 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 TBX10O75333 385 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 PAX3P23760 479 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 LMO2P25791 158 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 PSMC1P62191 440 aaKnown RBP19.63■□□□□ 0.73
SDF4-201ENST00000263741 PDXDC1Q6P996 788 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 LIMS2Q7Z4I7 341 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 RNF214Q8ND24 703 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 LMO3Q8TAP4 145 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 NIF3L1Q9GZT8 377 aa19.63■□□□□ 0.73
SDF4-201ENST00000263741 ARHGEF37A1IGU5 675 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 TGM5O43548 720 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 PDGFRBP09619 1106 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 CD58P19256 250 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 SLC8B1Q6J4K2 584 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 CCDC150Q8NCX0 1101 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 OR6B3Q8NGW1 331 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 SLC22A17Q8WUG5 538 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 TAF4BQ92750 862 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 LPIN3Q9BQK8 851 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 APOL5Q9BWW9 433 aa19.62■□□□□ 0.73
SDF4-201ENST00000263741 INTS2Q9H0H0 1204 aaKnown RBP19.62■□□□□ 0.73
SDF4-201ENST00000263741 ATP2C2O75185 946 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms