RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 LDHAP00338 332 aaKnown RBP23.92■■□□□ 1.42
MCF2L-201ENST00000261963 GNA15P30679 374 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 NOP14P78316 857 aaKnown RBP23.92■■□□□ 1.42
MCF2L-201ENST00000261963 CNGA2Q16280 664 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 ADAM22Q9P0K1 906 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 R3HDM2Q9Y2K5 976 aaKnown RBP23.92■■□□□ 1.42
MCF2L-201ENST00000261963 ABL2P42684 1182 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 HIRAP54198 1017 aaPredicted RBP23.91■■□□□ 1.42
MCF2L-201ENST00000261963 PTP4A2Q12974 167 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 MAMLD1Q13495 774 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 TAF11Q15544 211 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 RBBP8NLQ8NC74 664 aaPredicted RBP23.91■■□□□ 1.42
MCF2L-201ENST00000261963 FAM167BQ9BTA0 163 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 DCLK3Q9C098 648 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 WHRNQ9P202 907 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 BTBD7Q9P203 1132 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 AHCYL1O43865 530 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 FESP07332 822 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 IVDP26440 423 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 THEMIS2Q5TEJ8 643 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 RHBDF2Q6PJF5 856 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 LBX2Q6XYB7 198 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 TRIM72Q6ZMU5 477 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 TAOK1Q7L7X3 1001 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 EPS8L3Q8TE67 593 aaKnown RBP23.91■■□□□ 1.42
MCF2L-201ENST00000261963 OSBPL1AQ9BXW6 950 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 TMEM134Q9H6X4 195 aa23.91■■□□□ 1.42
MCF2L-201ENST00000261963 CPSF2Q9P2I0 782 aaKnown RBP23.91■■□□□ 1.42
MCF2L-201ENST00000261963 RFC5P40937 340 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 TAS2R40P59535 323 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 CALCOCO2Q13137 446 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 PHF13Q86YI8 300 aaPredicted RBP23.9■■□□□ 1.42
MCF2L-201ENST00000261963 ADCY3O60266 1144 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 NEFHP12036 1026 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 KLF1Q13351 362 aaPredicted RBP23.9■■□□□ 1.42
MCF2L-201ENST00000261963 NCOA4Q13772 614 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 LIN9Q5TKA1 542 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 PLEKHA7Q6IQ23 1121 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 CCDC25Q86WR0 208 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 DYDC1Q8WWB3 177 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 NAF1Q96HR8 494 aaKnown RBP23.9■■□□□ 1.42
MCF2L-201ENST00000261963 CCDC113Q9H0I3 377 aa23.9■■□□□ 1.42
MCF2L-201ENST00000261963 USP2O75604 605 aaPredicted RBP23.89■■□□□ 1.42
MCF2L-201ENST00000261963 AP1G2O75843 785 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 HARSP12081 509 aaKnown RBP23.89■■□□□ 1.42
MCF2L-201ENST00000261963 EDNRBP24530 442 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 PTK6Q13882 451 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 TNFAIP8L3Q5GJ75 292 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 MAIP1Q8WWC4 291 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 GPRC5DQ9NZD1 345 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 ASIC3Q9UHC3 531 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.89■■□□□ 1.42
MCF2L-201ENST00000261963 SNCAIPQ9Y6H5 919 aa23.89■■□□□ 1.42
MCF2L-201ENST00000261963 SOWAHBA6NEL2 793 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 FAM189A1O60320 539 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 RALAP11233 206 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 TBXAS1P24557 533 aaPredicted RBP23.89■■□□□ 1.41
MCF2L-201ENST00000261963 ASRGL1Q7L266 308 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.89■■□□□ 1.41
MCF2L-201ENST00000261963 UBR7Q8N806 425 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 VCPIP1Q96JH7 1222 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 PLCD4Q9BRC7 762 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 HEMGNQ9BXL5 484 aa23.89■■□□□ 1.41
MCF2L-201ENST00000261963 PSTPIP1O43586 416 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 GJB6O95452 261 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 CHKAP35790 457 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 TNFSF9P41273 254 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 ZNF132P52740 706 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 ANKS1BQ7Z6G8 1248 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 DDX23Q9BUQ8 820 aaKnown RBP23.88■■□□□ 1.41
MCF2L-201ENST00000261963 CDC42EP4Q9H3Q1 356 aaKnown RBP23.88■■□□□ 1.41
MCF2L-201ENST00000261963 FGFR1OP2Q9NVK5 253 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 PPP2R3BQ9Y5P8 575 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 WDR90Q96KV7 1748 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 THAP12O43422 761 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 WFS1O76024 890 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 SLCO1A2P46721 670 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 TRIP13Q15645 432 aaPredicted RBP23.88■■□□□ 1.41
MCF2L-201ENST00000261963 TRMT10CQ7L0Y3 403 aaKnown RBP23.88■■□□□ 1.41
MCF2L-201ENST00000261963 BRSK2Q8IWQ3 736 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 NRBP2Q9NSY0 501 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 ARL2BPQ9Y2Y0 163 aa23.88■■□□□ 1.41
MCF2L-201ENST00000261963 TCP11X1B4DZS4 312 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 CST3P01034 146 aaPredicted RBP23.87■■□□□ 1.41
MCF2L-201ENST00000261963 ITIH2P19823 946 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 STAT5BP51692 787 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 AUHQ13825 339 aaKnown RBP23.87■■□□□ 1.41
MCF2L-201ENST00000261963 VGLL4Q14135 290 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 SLC30A9Q6PML9 568 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 DLK2Q6UY11 383 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 SYDE1Q6ZW31 735 aaPredicted RBP23.87■■□□□ 1.41
MCF2L-201ENST00000261963 CNKSR2Q8WXI2 1034 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 SNF8Q96H20 258 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 RXFP1Q9HBX9 757 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 NEU2Q9Y3R4 380 aa23.87■■□□□ 1.41
MCF2L-201ENST00000261963 MAFO75444 373 aaPredicted RBP23.86■■□□□ 1.41
MCF2L-201ENST00000261963 MAN1A1P33908 653 aa23.86■■□□□ 1.41
MCF2L-201ENST00000261963 C1QBPQ07021 282 aaKnown RBP23.86■■□□□ 1.41
MCF2L-201ENST00000261963 RIOX2Q8IUF8 465 aa23.86■■□□□ 1.41
MCF2L-201ENST00000261963 RHOT1Q8IXI2 618 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms