RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PGBD4Q96DM1 585 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 PIDD1Q9HB75 910 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 DDX18Q9NVP1 670 aaKnown RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 IL1RAPL1Q9NZN1 696 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 AIM2O14862 343 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 MX2P20592 715 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 ATP4AP20648 1035 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 CACNA2D1P54289 1103 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 SLC8A3P57103 927 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 TRAF1Q13077 416 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 AMHR2Q16671 573 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 DSTYKQ6XUX3 929 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 CRLF3Q8IUI8 442 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 PRPF31Q8WWY3 499 aaKnown RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 ZNF75CPQ92670 426 aaPredicted RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 MAGEB18Q96M61 343 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 TSNARE1Q96NA8 513 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 SH3GL3Q99963 347 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 KIAA1586Q9HCI6 787 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 ZDHHC18Q9NUE0 388 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 PSMC3IPQ9P2W1 217 aaPredicted RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 NR2E3Q9Y5X4 410 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 COMMD10Q9Y6G5 202 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 PEX1O43933 1283 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 UNC5CO95185 931 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 APBA3O96018 575 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 SREBF1P36956 1147 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 AQP5P55064 265 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 RPS6P62753 249 aaKnown RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 ZDHHC14Q8IZN3 488 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 EXT2Q93063 718 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 ZNF317Q96PQ6 595 aaPredicted RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 MARF1Q9Y4F3 1742 aaKnown RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 PPP1R12AO14974 1030 aaPredicted RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 MGRN1O60291 552 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 KHDC1Q4VXA5 237 aaKnown RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 LGSNQ5TDP6 509 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 NPNTQ6UXI9 565 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 AGGF1Q8N302 714 aaeCLIP10.62□□□□□ -0.71
PALB2-201ENST00000261584 ATP11CQ8NB49 1132 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 ETNPPLQ8TBG4 499 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 DENND2DQ9H6A0 471 aaPredicted RBP10.62□□□□□ -0.71
PALB2-201ENST00000261584 FAM49BQ9NUQ9 324 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 UVRAGQ9P2Y5 699 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 ZNF711Q9Y462 761 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 WASF2Q9Y6W5 498 aa10.62□□□□□ -0.71
PALB2-201ENST00000261584 UBE4BO95155 1302 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 CCDC22O60826 627 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 PGM3O95394 542 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 GHRP10912 638 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 KRT3P12035 628 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 TAC1P20366 129 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 BPIFB4P59827 614 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 ASPHQ12797 758 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 LAYNQ6UX15 382 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 GPD1LQ8N335 351 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 ERLEC1Q96DZ1 483 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 ROPN1BQ9BZX4 212 aaPredicted RBP10.61□□□□□ -0.71
PALB2-201ENST00000261584 ROPN1Q9HAT0 212 aaPredicted RBP10.61□□□□□ -0.71
PALB2-201ENST00000261584 FBXO40Q9UH90 709 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 TBX20Q9UMR3 447 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 PCDHA3Q9Y5H8 950 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 M0QYV0 167 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 SLC4A1P02730 911 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 CASP2P42575 452 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 PAPOLAP51003 745 aaKnown RBP10.61□□□□□ -0.71
PALB2-201ENST00000261584 PSMC5P62195 406 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 LMNB2Q03252 620 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 NCOA4Q13772 614 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 UGCGQ16739 394 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 ANO4Q32M45 955 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 MAP7D1Q3KQU3 841 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 APOBEC3HQ6NTF7 200 aaKnown RBP10.61□□□□□ -0.71
PALB2-201ENST00000261584 VSTM1Q6UX27 236 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 NCAPG2Q86XI2 1143 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 CCNYL1Q8N7R7 359 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 STK32AQ8WU08 396 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 RNF34Q969K3 372 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 TLCD1Q96CP7 247 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 SGF29Q96ES7 293 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 TRIM56Q9BRZ2 755 aaKnown RBP10.61□□□□□ -0.71
PALB2-201ENST00000261584 MTMR12Q9C0I1 747 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 RNPEPL1Q9HAU8 725 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 ARL8BQ9NVJ2 186 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 FER1L4A9Z1Z3 1794 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 IQANK1A0A1B0GTG1 560 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 KCNA4P22459 653 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 CALB2P22676 271 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 RARRES1P49788 294 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 PRAMEP78395 509 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 RASA2Q15283 850 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 OTOAQ7RTW8 1153 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 PTAR1Q7Z6K3 402 aaPredicted RBP10.61□□□□□ -0.71
PALB2-201ENST00000261584 TMEM35BQ8NCS4 154 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 ADPGKQ9BRR6 497 aa10.61□□□□□ -0.71
PALB2-201ENST00000261584 TUFT1Q9NNX1 390 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms