RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SMYD5Q6GMV2 418 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 GOLGA2P5Q9HBQ8 144 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 HMX1Q9NP08 348 aaPredicted RBP23.78■■□□□ 1.4
SIX3-201ENST00000260653 RBM12Q9NTZ6 932 aaKnown RBP23.78■■□□□ 1.4
SIX3-201ENST00000260653 ANAPC7Q9UJX3 599 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 SNX9Q9Y5X1 595 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 RPLP2P05387 115 aaKnown RBP23.77■■□□□ 1.4
SIX3-201ENST00000260653 PTPN11Q06124 597 aaPredicted RBP23.77■■□□□ 1.4
SIX3-201ENST00000260653 INCA1Q0VD86 236 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 DCAF12L1Q5VU92 463 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 WDTC1Q8N5D0 677 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 TMEM176AQ96HP8 235 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 ZFP42Q96MM3 310 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 GLT1D1Q96MS3 346 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 BARX2Q9UMQ3 279 aaPredicted RBP23.77■■□□□ 1.4
SIX3-201ENST00000260653 PTCH2Q9Y6C5 1203 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 GHRP10912 638 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 MMP8P22894 467 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 NDST1P52848 882 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 C1QBPQ07021 282 aaKnown RBP23.77■■□□□ 1.4
SIX3-201ENST00000260653 LRRC52Q8N7C0 313 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 VCPIP1Q96JH7 1222 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 FAM105AQ9NUU6 356 aa23.77■■□□□ 1.4
SIX3-201ENST00000260653 CD52P31358 61 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 CLCN6P51797 869 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 PTK7Q13308 1070 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 DENND1BQ6P3S1 775 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 TMEM35BQ8NCS4 154 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 ALG3Q92685 438 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 FRMPD3Q5JV73 1810 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 MOXD2PA6NHM9 499 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 MARCKSL1P49006 195 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 FBXO47Q5MNV8 452 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 LIN9Q5TKA1 542 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 KRT35Q92764 455 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 PADI3Q9ULW8 664 aa23.76■■□□□ 1.39
SIX3-201ENST00000260653 PTGESO14684 152 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 GPR182O15218 404 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 CHRM1P11229 460 aaPredicted RBP23.75■■□□□ 1.39
SIX3-201ENST00000260653 CDH5P33151 784 aaPredicted RBP23.75■■□□□ 1.39
SIX3-201ENST00000260653 TRIM71Q2Q1W2 868 aaKnown RBP23.75■■□□□ 1.39
SIX3-201ENST00000260653 PPP1R2P3Q6NXS1 205 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 MMGT1Q8N4V1 131 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 USP38Q8NB14 1042 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 RPS6KC1Q96S38 1066 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 SELENOOQ9BVL4 669 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 CHST12Q9NRB3 414 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 MED7O43513 233 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 CD4P01730 458 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 MAMLD1Q13495 774 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 ACTRT1Q8TDG2 376 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 MRPL45Q9BRJ2 306 aaKnown RBP23.75■■□□□ 1.39
SIX3-201ENST00000260653 TRIM17Q9Y577 477 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 CEP83Q9Y592 693 aa23.75■■□□□ 1.39
SIX3-201ENST00000260653 PIRO00625 290 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 ARHGEF6Q15052 776 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 PLEKHA7Q6IQ23 1121 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 CD101Q93033 1021 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 HEXIM2Q96MH2 286 aaKnown RBP23.74■■□□□ 1.39
SIX3-201ENST00000260653 ZNF518BQ9C0D4 1074 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 ERVK-5Q9HDB9 667 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 SAGE1Q9NXZ1 904 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 A0A1W2PQ45 241 aaPredicted RBP23.74■■□□□ 1.39
SIX3-201ENST00000260653 A0A1W2PQY0 241 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 XPOTO43592 962 aaKnown RBP23.74■■□□□ 1.39
SIX3-201ENST00000260653 SPOPO43791 374 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 GJB6O95452 261 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 LPIN1Q14693 890 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 LPPQ93052 612 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 ARGLU1Q9NWB6 273 aaPredicted RBP23.74■■□□□ 1.39
SIX3-201ENST00000260653 CYTH4Q9UIA0 394 aa23.74■■□□□ 1.39
SIX3-201ENST00000260653 MIF4GDA9UHW6 222 aaKnown RBP23.73■■□□□ 1.39
SIX3-201ENST00000260653 SPTLC1O15269 473 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 MGEA5O60502 916 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 PAK2Q13177 524 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 RASGEF1CQ8N431 466 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 SH3TC2Q8TF17 1288 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 TSPAN18Q96SJ8 248 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 TRPV6Q9H1D0 765 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 PGRMC1O00264 195 aaKnown RBP23.73■■□□□ 1.39
SIX3-201ENST00000260653 ATF7P17544 494 aaPredicted RBP23.73■■□□□ 1.39
SIX3-201ENST00000260653 MLH1P40692 756 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 MRPS25P82663 173 aaKnown RBP23.73■■□□□ 1.39
SIX3-201ENST00000260653 ZNF618Q5T7W0 954 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 DPH6Q7L8W6 267 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.73■■□□□ 1.39
SIX3-201ENST00000260653 TSEN34Q9BSV6 310 aaKnown RBP23.73■■□□□ 1.39
SIX3-201ENST00000260653 NT5C1AQ9BXI3 368 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 CARD9Q9H257 536 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 LHX5Q9H2C1 402 aa23.73■■□□□ 1.39
SIX3-201ENST00000260653 FAM124BQ9H5Z6 455 aaPredicted RBP23.73■■□□□ 1.39
SIX3-201ENST00000260653 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.73■■□□□ 1.39
SIX3-201ENST00000260653 ITGA4P13612 1032 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 AFF1P51825 1210 aaKnown RBP23.72■■□□□ 1.39
SIX3-201ENST00000260653 VSNL1P62760 191 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 ZNF211Q13398 564 aaPredicted RBP23.72■■□□□ 1.39
SIX3-201ENST00000260653 PPP1R10Q96QC0 940 aaKnown RBP23.72■■□□□ 1.39
SIX3-201ENST00000260653 LRRC1Q9BTT6 524 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 RAB21Q9UL25 225 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 NME7Q9Y5B8 376 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms