RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CDH5P33151 784 aaPredicted RBP29.42■■■□□ 2.3
CCM2-201ENST00000258781 SNX17Q15036 470 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 PLEKHA7Q6IQ23 1121 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 IFT20Q8IY31 132 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 TMEM35BQ8NCS4 154 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 AP1M1Q9BXS5 423 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 MOXD2PA6NHM9 499 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 MMP8P22894 467 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 SLC1A1P43005 524 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 PLA2G4AP47712 749 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 ZNF394Q53GI3 561 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 MMS22LQ6ZRQ5 1243 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 KLHL7Q8IXQ5 586 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 KIF12Q96FN5 646 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 HPDLQ96IR7 371 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 SNX27Q96L92 541 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 SLITRK6Q9H5Y7 841 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 GDF3Q9NR23 364 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 AGAP1Q9UPQ3 857 aa29.41■■■□□ 2.3
CCM2-201ENST00000258781 HEXIM1O94992 359 aaKnown RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 HSPA8P11142 646 aaKnown RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 ITGA7Q13683 1181 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 PPP2R5EQ16537 467 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 AENQ8WTP8 325 aaKnown RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 SDCBP2Q9H190 292 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 MED7O43513 233 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 CALB1P05937 261 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 MYBL2P10244 700 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 SSTR3P32745 418 aaPredicted RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 MARCKSL1P49006 195 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 CRYBB1P53674 252 aaPredicted RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 YARSP54577 528 aaKnown RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 MRPS25P82663 173 aaKnown RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 CASP8Q14790 479 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 TAF2Q6P1X5 1199 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 TMEM40Q8WWA1 233 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 TFAP2BQ92481 460 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 TSEN34Q9BSV6 310 aaKnown RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 EIF2AQ9BY44 585 aaKnown RBP29.4■■■□□ 2.3
CCM2-201ENST00000258781 SNTG2Q9NY99 539 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 CEP83Q9Y592 693 aa29.4■■■□□ 2.3
CCM2-201ENST00000258781 A0A1W2PQ45 241 aaPredicted RBP29.39■■■□□ 2.3
CCM2-201ENST00000258781 A0A1W2PQY0 241 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 MYO1FO00160 1098 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 RAD51CO43502 376 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 CABYRO75952 493 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 RAP1GAPP47736 663 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 SEL1L2Q5TEA6 688 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 TTC39CQ8N584 583 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 GLT1D1Q96MS3 346 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 SMYD3Q9H7B4 428 aa29.39■■■□□ 2.3
CCM2-201ENST00000258781 GLI1P08151 1106 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 RAD23BP54727 409 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 CBX1P83916 185 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 ZNF211Q13398 564 aaPredicted RBP29.38■■■□□ 2.29
CCM2-201ENST00000258781 MAMLD1Q13495 774 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 SERINC5Q86VE9 423 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 DEFB118Q96PH6 123 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 PARVAQ9NVD7 372 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 GOLGA6L10A0A0M3HER8 536 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 SART1O43290 800 aaKnown RBP29.38■■■□□ 2.29
CCM2-201ENST00000258781 CILPO75339 1184 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 ITGA4P13612 1032 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 LHX5Q9H2C1 402 aa29.38■■■□□ 2.29
CCM2-201ENST00000258781 PROSCO94903 275 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 CCL5P13501 91 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 GUCY2FP51841 1108 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 CDH8P55286 799 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 RWDD2BP57060 319 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 C2CD6Q53TS8 623 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 TMEM130Q8N3G9 435 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 ARRDC4Q8NCT1 418 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 C1orf131Q8NDD1 294 aaKnown RBP29.37■■■□□ 2.29
CCM2-201ENST00000258781 WHAMMQ8TF30 809 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 TRIM6Q9C030 488 aaPredicted RBP29.37■■■□□ 2.29
CCM2-201ENST00000258781 VIPAS39Q9H9C1 493 aa29.37■■■□□ 2.29
CCM2-201ENST00000258781 EPHB4P54760 987 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 GUCY2DQ02846 1103 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 PTGISQ16647 500 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 LLGL2Q6P1M3 1020 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 CPNE8Q86YQ8 564 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 GSPT2Q8IYD1 628 aaKnown RBP29.36■■■□□ 2.29
CCM2-201ENST00000258781 CCDC26Q8TAB7 109 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 UBXN6Q9BZV1 441 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 DDX47Q9H0S4 455 aaKnown RBP29.36■■■□□ 2.29
CCM2-201ENST00000258781 RNF208Q9H0X6 261 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 TRMT13Q9NUP7 481 aaKnown RBP29.36■■■□□ 2.29
CCM2-201ENST00000258781 CNTN3Q9P232 1028 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 LCMT1Q9UIC8 334 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 PIN4Q9Y237 131 aaKnown RBP29.36■■■□□ 2.29
CCM2-201ENST00000258781 A0A0U1RQG5 324 aaPredicted RBP29.36■■■□□ 2.29
CCM2-201ENST00000258781 INCA1Q0VD86 236 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 ZBTB6Q15916 424 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 ALKAL1Q6UXT8 129 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 SLC4A11Q8NBS3 891 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 TSPAN18Q96SJ8 248 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 TRIM7Q9C029 511 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 EPB41L5Q9HCM4 733 aa29.36■■■□□ 2.29
CCM2-201ENST00000258781 CD19P15391 556 aa29.35■■■□□ 2.29
CCM2-201ENST00000258781 MYO1EQ12965 1108 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms