RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 KRT39Q6A163 491 aa12.96□□□□□ -0.34
USP30-201ENST00000257548 KRT80Q6KB66 452 aa12.96□□□□□ -0.34
USP30-201ENST00000257548 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.34
USP30-201ENST00000257548 WDR75Q8IWA0 830 aaKnown RBP12.96□□□□□ -0.34
USP30-201ENST00000257548 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.34
USP30-201ENST00000257548 SENP1Q9P0U3 644 aa12.96□□□□□ -0.34
USP30-201ENST00000257548 AK5Q9Y6K8 562 aa12.96□□□□□ -0.34
USP30-201ENST00000257548 LAMA4Q16363 1823 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 LMTK3Q96Q04 1460 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 ESYT2A0FGR8 921 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 LIG4P49917 911 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 ORC2Q13416 577 aaPredicted RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 PARP6Q2NL67 630 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 MFSD5Q6N075 450 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 TRABD2AQ86V40 505 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 ZDHHC14Q8IZN3 488 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 FBXO36Q8NEA4 188 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 FBXL13Q8NEE6 735 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 EPS8L1Q8TE68 723 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 NMUR2Q9GZQ4 415 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 TRIM49D1C9J1S8 452 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 FOSP01100 380 aaPredicted RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 SEPT6Q14141 434 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 RIPOR1Q6ZS17 1223 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 GSTCDQ8NEC7 633 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 GRIP2Q9C0E4 1043 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 SIX2Q9NPC8 291 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 ETNK2Q9NVF9 386 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 EXOC7Q9UPT5 735 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 NEMP1O14524 444 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 AIM2O14862 343 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 SEC24DO94855 1032 aaPredicted RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 PRAMEP78395 509 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 PDK4Q16654 411 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 MAPK6Q16659 721 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 SPOPLQ6IQ16 392 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 MTHFD1LQ6UB35 978 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 ERLEC1Q96DZ1 483 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 ZNF333Q96JL9 665 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 Q9H521 79 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 KMT5AQ9NQR1 393 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 TAS2R1Q9NYW7 299 aa12.95□□□□□ -0.34
USP30-201ENST00000257548 MTO1Q9Y2Z2 717 aaKnown RBP12.95□□□□□ -0.34
USP30-201ENST00000257548 SLIT2O94813 1529 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 DENND3A2RUS2 1198 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 LIN7AO14910 233 aaPredicted RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 STAM2O75886 525 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 KRT37O76014 449 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 NPTXRO95502 500 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 NELFEP18615 380 aaKnown RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 OSTNP61366 133 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 NFX1Q12986 1120 aaKnown RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 SLC45A4Q5BKX6 768 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 ZNF720Q7Z2F6 126 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 FAM71DQ8N9W8 422 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 LRRC42Q9Y546 428 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 H0YIN7 160 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 RAD17O75943 681 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 ACOT2P49753 483 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 RTP1P59025 263 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 POU5F1Q01860 360 aaKnown RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 DMP1Q13316 513 aaPredicted RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 CLEC4GQ6UXB4 293 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 RINLQ6ZS11 566 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 MIS12Q9H081 205 aa12.94□□□□□ -0.34
USP30-201ENST00000257548 XPO7Q9UIA9 1087 aaKnown RBP12.94□□□□□ -0.34
USP30-201ENST00000257548 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 CASQ2O14958 399 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 ATP6V1G1O75348 118 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 CLPTM1O96005 669 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 APRTP07741 180 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 ALAS1P13196 640 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 SOX11P35716 441 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 GALNTL6Q49A17 601 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 ATG16L1Q676U5 607 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 DCLK2Q8N568 766 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 LRRN4Q8WUT4 740 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 OXNAD1Q96HP4 312 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 WWP1Q9H0M0 922 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 NID2Q14112 1375 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 TAF1P21675 1872 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 E7ENQ6 273 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 CST8O60676 142 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 GNA15P30679 374 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms