RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 CCDC14Q49A88 953 aa18.45■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF667Q5HYK9 610 aa18.45■□□□□ 0.54
NDFIP1-201ENST00000253814 WDR75Q8IWA0 830 aaKnown RBP18.45■□□□□ 0.54
NDFIP1-201ENST00000253814 TTC13Q8NBP0 860 aa18.45■□□□□ 0.54
NDFIP1-201ENST00000253814 PAFAH2Q99487 392 aa18.45■□□□□ 0.54
NDFIP1-201ENST00000253814 C12orf65Q9H3J6 166 aaKnown RBP18.45■□□□□ 0.54
NDFIP1-201ENST00000253814 FIS1Q9Y3D6 152 aa18.45■□□□□ 0.54
NDFIP1-201ENST00000253814 A6NJR5 290 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 BZW1Q7L1Q6 419 aaKnown RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 NCAPG2Q86XI2 1143 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 TRIM42Q8IWZ5 723 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 ACTL9Q8TC94 416 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 TCP10LQ8TDR4 215 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 PPP1R36Q96LQ0 422 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 FGD4Q96M96 766 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 TBC1D10AQ9BXI6 508 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 RANBP17Q9H2T7 1088 aaKnown RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 PCMTD2Q9NV79 361 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 AFF2P51816 1311 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 LOC100653049A0A140TA62 436 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 MGRN1O60291 552 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 KRT34O76011 436 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 LDHAP00338 332 aaKnown RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 KRT7P08729 469 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 PTGIRP43119 386 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 IRX1P78414 480 aaPredicted RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 OTUD4Q01804 1114 aaKnown RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 UBAP2Q5T6F2 1119 aaKnown RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 FAM71AQ8IYT1 594 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 NSL1Q96IY1 281 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF277Q9NRM2 450 aaPredicted RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 HESX1Q9UBX0 185 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 FAM198AQ9UFP1 575 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 STK10O94804 968 aaKnown RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 ARL1P40616 181 aaPredicted RBP18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 PRKCEQ02156 737 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 CUL2Q13617 745 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 SPDYCQ5MJ68 293 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 TRIM50Q86XT4 487 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 APOL6Q9BWW8 343 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 IVNS1ABPQ9Y6Y0 642 aa18.44■□□□□ 0.54
NDFIP1-201ENST00000253814 PIK3CDO00329 1044 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 KCNN4O15554 427 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 DGAT1O75907 488 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 NR3C2P08235 984 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 CIITAP33076 1130 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 ROR1Q01973 937 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 CYP24A1Q07973 514 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 GEN1Q17RS7 908 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 RABGAP1LQ5R372 815 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 FAM182AQ5T1J6 154 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 CYP4X1Q8N118 509 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 RIBC1Q8N443 379 aaPredicted RBP18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 CDKL2Q92772 493 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 SCYL1Q96KG9 808 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 VPS11Q9H270 941 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 KAT6AQ92794 2004 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 SNED1Q8TER0 1413 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 TRIM49D1C9J1S8 452 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 M0QYV0 167 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 KRT38O76015 456 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 MYL2P10916 166 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 BGNP21810 368 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 BCAR1P56945 870 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 COG7P83436 770 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 SESTD1Q86VW0 696 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF317Q96PQ6 595 aaPredicted RBP18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 LRRC19Q9H756 370 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 JPH1Q9HDC5 661 aaPredicted RBP18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 F8VP50 259 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 ATXN3P54252 364 aaPredicted RBP18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 MROH9Q5TGP6 573 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 CHADLQ6NUI6 762 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 ECHDC2Q86YB7 292 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 SLC25A41Q8N5S1 370 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 IL31RAQ8NI17 732 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 TTC8Q8TAM2 541 aa18.43■□□□□ 0.54
NDFIP1-201ENST00000253814 A0A1W2PPM1 405 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 C5orf60A6NFR6 353 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 PAEPP09466 180 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 SERPINB3P29508 390 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 MRPS35P82673 323 aaKnown RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 PTK6Q13882 451 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 AMIGO3Q86WK7 504 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 LRRC6Q86X45 466 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 SHC3Q92529 594 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 APOBEC2Q9Y235 224 aaKnown RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 HMGB2P26583 209 aaKnown RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 TAS2R40P59535 323 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 CRELD2Q6UXH1 353 aaPredicted RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF75CPQ92670 426 aaPredicted RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 SH3GL3Q99963 347 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 KLC2Q9H0B6 622 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 ZC3H7BQ9UGR2 993 aaKnown RBP18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 hCG_2014768A0A024R1R8 64 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 MED7O43513 233 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms