RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 ZNF449Q6P9G9 518 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 KIAA0319LQ8IZA0 1049 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 CKAP2Q8WWK9 683 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 TFAP2BQ92481 460 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 SAE1Q9UBE0 346 aaPredicted RBP10.71□□□□□ -0.7
COPB1-201ENST00000249923 TRIM33Q9UPN9 1127 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 PCDHB4Q9Y5E5 795 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 TMEM191CA6NGB0 347 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 C3orf70A6NLC5 250 aaPredicted RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 ABLIM1O14639 778 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 TMEM191BP0C7N4 346 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 GSCP56915 257 aaPredicted RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 XRRA1Q6P2D8 792 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 VSIG1Q86XK7 387 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 RELL1Q8IUW5 271 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 RHOT1Q8IXI2 618 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 SRRM1Q8IYB3 904 aaKnown RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 ZNF606Q8WXB4 792 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 KCNN1Q92952 543 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 CYTH4Q9UIA0 394 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 PTPRFP10586 1907 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 CLGNO14967 610 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 BRAFP15056 766 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 POLGP54098 1239 aaPredicted RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 TGFB2P61812 414 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 NFX1Q12986 1120 aaKnown RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 KAZNQ674X7 775 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 RFX8Q6ZV50 586 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 ZNF280CQ8ND82 737 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 EXD1Q8NHP7 514 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 TAOK3Q9H2K8 898 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 IGKV6D-21A0A0A0MT36 114 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 LRRIQ4A6NIV6 560 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 SPDYE16A6NNV3 312 aaPredicted RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 A8MUI8 341 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 MAFGO15525 162 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 BRD2P25440 801 aaKnown RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 TARBP2Q15633 366 aaKnown RBP10.7□□□□□ -0.7
COPB1-201ENST00000249923 ZNF394Q53GI3 561 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 XKR3Q5GH77 459 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 SCYL3Q8IZE3 742 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 ZBTB10Q96DT7 871 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 FNBP1Q96RU3 617 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 RBM15Q96T37 977 aaKnown RBP eCLIP10.7□□□□□ -0.7
COPB1-201ENST00000249923 CGRRF1Q99675 332 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 AFG3L2Q9Y4W6 797 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 NUMBLQ9Y6R0 609 aa10.7□□□□□ -0.7
COPB1-201ENST00000249923 OATP04181 439 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 HARSP12081 509 aaKnown RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 PECAM1P16284 738 aaPredicted RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 NRLP54845 237 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 GDF10P55107 478 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 NCOA4Q13772 614 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 OASLQ15646 514 aaKnown RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 CCDC6Q16204 474 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 WLSQ5T9L3 541 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 CYP4F22Q6NT55 531 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 SYDE1Q6ZW31 735 aaPredicted RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 TAOK1Q7L7X3 1001 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 ZCCHC9Q8N567 271 aaKnown RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 FAM81BQ96LP2 452 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 MCEEQ96PE7 176 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 MSTO1Q9BUK6 570 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 MTMR12Q9C0I1 747 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 MSCO60682 206 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 GAS8O95995 478 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 TAC1P20366 129 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 GMPSP49915 693 aaPredicted RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 HIRAP54198 1017 aaPredicted RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 WDR44Q5JSH3 913 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 CYP4A22Q5TCH4 519 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 FEZF2Q8TBJ5 459 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 P3H4Q92791 437 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 IFT74Q96LB3 600 aa10.69□□□□□ -0.7
COPB1-201ENST00000249923 USP15Q9Y4E8 981 aaPredicted RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.69□□□□□ -0.7
COPB1-201ENST00000249923 ZBTB42B2RXF5 422 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 ASS1P00966 412 aaKnown RBP10.68□□□□□ -0.7
COPB1-201ENST00000249923 UBA1P22314 1058 aaKnown RBP10.68□□□□□ -0.7
COPB1-201ENST00000249923 IL1R2P27930 398 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 NAMPTP43490 491 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 MYL6P60660 151 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
COPB1-201ENST00000249923 SEPT7Q16181 437 aaKnown RBP10.68□□□□□ -0.7
COPB1-201ENST00000249923 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 DENND1AQ8TEH3 1009 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 NOD2Q9HC29 1040 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 STK32BQ9NY57 414 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 WDR91A4D1P6 747 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 ATP2A1O14983 1001 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 MAGEA4P43358 317 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 EFTUD2Q15029 972 aaKnown RBP eCLIP10.68□□□□□ -0.77e-9■■■■□ 22.8
COPB1-201ENST00000249923 CATSPERGQ6ZRH7 1159 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms