RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 GOLGA6AQ9NYA3 693 aa24.28■■□□□ 1.48
HOXD9-201ENST00000249499 MBLAC1A4D2B0 266 aaPredicted RBP24.27■■□□□ 1.48
HOXD9-201ENST00000249499 CSDE1O75534 798 aaKnown RBP24.27■■□□□ 1.48
HOXD9-201ENST00000249499 HUNKP57058 714 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 SCARA5Q6ZMJ2 495 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 SYDE1Q6ZW31 735 aaPredicted RBP24.27■■□□□ 1.48
HOXD9-201ENST00000249499 C3orf20Q8ND61 904 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 EXD1Q8NHP7 514 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 TFAP2BQ92481 460 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 FEZ2Q9UHY8 353 aaPredicted RBP24.27■■□□□ 1.48
HOXD9-201ENST00000249499 CPA4Q9UI42 421 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 POLIQ9UNA4 740 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 Q9Y3F1 56 aa24.27■■□□□ 1.48
HOXD9-201ENST00000249499 ADCY6O43306 1168 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 RBP5P82980 135 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 C2CD6Q53TS8 623 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 OLFML2BQ68BL8 750 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 DNAJC24Q6P3W2 148 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 TTC27Q6P3X3 843 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 TMC3Q7Z5M5 1100 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 ERICH1Q86X53 443 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 NIPA2Q8N8Q9 360 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 DPH5Q9H2P9 285 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 CREBZFQ9NS37 354 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 ZDHHC18Q9NUE0 388 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 CILPO75339 1184 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 HSD17B3P37058 310 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 CETN2P41208 172 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 RAD23BP54727 409 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 PIGHQ14442 188 aaPredicted RBP24.26■■□□□ 1.47
HOXD9-201ENST00000249499 ZNF394Q53GI3 561 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 SGO2Q562F6 1265 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 PPP1R15BQ5SWA1 713 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 LLGL2Q6P1M3 1020 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 RASAL3Q86YV0 1011 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 CCDC105Q8IYK2 499 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 WDTC1Q8N5D0 677 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 USP6NLQ92738 828 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 PPP1R16BQ96T49 567 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 SETD4Q9NVD3 440 aa24.26■■□□□ 1.47
HOXD9-201ENST00000249499 DYNC1LI2O43237 492 aaPredicted RBP24.25■■□□□ 1.47
HOXD9-201ENST00000249499 PPFIA2O75334 1257 aa24.25■■□□□ 1.47
HOXD9-201ENST00000249499 ZNF865P0CJ78 1059 aaPredicted RBP24.25■■□□□ 1.47
HOXD9-201ENST00000249499 WDR35Q9P2L0 1181 aa24.25■■□□□ 1.47
HOXD9-201ENST00000249499 TCRBV7S2A1N4TA0A589 114 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 ECEL1O95672 775 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 SMIM10L2AP0DMW4 78 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 SMIM10L2BP0DMW5 78 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 PHLDB2Q86SQ0 1253 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 GRK7Q8WTQ7 553 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 HPDLQ96IR7 371 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 TXLNGYQ9BZA5 131 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 KIAA1257Q9ULG3 409 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 MGAMO43451 1857 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 A6NNZ2 444 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 GPR32O75388 356 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 AXLP30530 894 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 SSTR3P32745 418 aaPredicted RBP24.24■■□□□ 1.47
HOXD9-201ENST00000249499 CPT1AP50416 773 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 PTPN11Q06124 597 aaPredicted RBP24.24■■□□□ 1.47
HOXD9-201ENST00000249499 INCA1Q0VD86 236 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 TUBB8Q3ZCM7 444 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 SLC27A1Q6PCB7 646 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 TLK2Q86UE8 772 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 KAT2BQ92831 832 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 TMEM176AQ96HP8 235 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 SDCBP2Q9H190 292 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 DPP3Q9NY33 737 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 PLAAQ9Y263 795 aa24.24■■□□□ 1.47
HOXD9-201ENST00000249499 HAS3O00219 553 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 IGF2BP3O00425 579 aaKnown RBP eCLIP24.23■■□□□ 1.47
HOXD9-201ENST00000249499 CD19P15391 556 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 LMAN1P49257 510 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 INHBEP58166 350 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 KLF1Q13351 362 aaPredicted RBP24.23■■□□□ 1.47
HOXD9-201ENST00000249499 TAF1CQ15572 869 aaPredicted RBP24.23■■□□□ 1.47
HOXD9-201ENST00000249499 DCUN1D2Q6PH85 259 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 SAPCD2Q86UD0 394 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 SLC4A11Q8NBS3 891 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 FNIP1Q8TF40 1166 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 RBM41Q96IZ5 413 aaKnown RBP24.23■■□□□ 1.47
HOXD9-201ENST00000249499 GRHL1Q9NZI5 618 aa24.23■■□□□ 1.47
HOXD9-201ENST00000249499 VDRP11473 427 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 TAS2R40P59535 323 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 UAP1Q16222 522 aaPredicted RBP24.22■■□□□ 1.47
HOXD9-201ENST00000249499 NOTUMQ6P988 496 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 C17orf99Q6UX52 265 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 RCOR2Q8IZ40 523 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 SOCS4Q8WXH5 440 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 TRIM31Q9BZY9 425 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 SMYD3Q9H7B4 428 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 MTRF1LQ9UGC7 380 aaKnown RBP24.22■■□□□ 1.47
HOXD9-201ENST00000249499 ABT1Q9ULW3 272 aaKnown RBP24.22■■□□□ 1.47
HOXD9-201ENST00000249499 BARX2Q9UMQ3 279 aaPredicted RBP24.22■■□□□ 1.47
HOXD9-201ENST00000249499 AGAP1Q9UPQ3 857 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 RALGAPA2Q2PPJ7 1873 aa24.22■■□□□ 1.47
HOXD9-201ENST00000249499 H0YGN5 161 aa24.21■■□□□ 1.47
HOXD9-201ENST00000249499 HMGCRP04035 888 aa24.21■■□□□ 1.47
HOXD9-201ENST00000249499 HOXA11P31270 313 aaPredicted RBP24.21■■□□□ 1.47
HOXD9-201ENST00000249499 RGS2P41220 211 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms