RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 GMPSP49915 693 aaPredicted RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 GRM1Q13255 1194 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 SEZ6Q53EL9 994 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 EAPPQ56P03 285 aaPredicted RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 DCUN1D2Q6PH85 259 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 SEPT14Q6ZU15 432 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 BRSK2Q8IWQ3 736 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 UBR7Q8N806 425 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 MAGEC3Q8TD91 643 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 TTC25Q96NG3 672 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 TGS1Q96RS0 853 aaKnown RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 ZNF518BQ9C0D4 1074 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 EURLQ9NYK6 297 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 RASA4BC9J798 803 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 RASA4O43374 803 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 GH1P01241 217 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 TAP1Q03518 808 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 NR1H3Q13133 447 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 CAPSQ13938 189 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 DNAJC24Q6P3W2 148 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 MFSD7Q6UXD7 560 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 PRUNE1Q86TP1 453 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 TMEM35BQ8NCS4 154 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 MCEEQ96PE7 176 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 TPX2Q9ULW0 747 aaKnown RBP17.35■□□□□ 0.37
HOXD3-201ENST00000249440 DRG1Q9Y295 367 aaKnown RBP17.35■□□□□ 0.37
HOXD3-201ENST00000249440 ARL2BPQ9Y2Y0 163 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 ARSEP51690 589 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 ELF3P78545 371 aaPredicted RBP17.35■□□□□ 0.37
HOXD3-201ENST00000249440 PIGHQ14442 188 aaPredicted RBP17.35■□□□□ 0.37
HOXD3-201ENST00000249440 SPATA21Q7Z572 469 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 ALLCQ8N6M5 410 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 CHST13Q8NET6 341 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 TCHPQ9BT92 498 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 SAYSD1Q9NPB0 183 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 IVNS1ABPQ9Y6Y0 642 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 LTBP3Q9NS15 1303 aa17.35■□□□□ 0.37
HOXD3-201ENST00000249440 EXOC1LA0A1B0GW35 172 aa17.34■□□□□ 0.37
HOXD3-201ENST00000249440 SPDYE16A6NNV3 312 aaPredicted RBP17.34■□□□□ 0.37
HOXD3-201ENST00000249440 FZD9O00144 591 aa17.34■□□□□ 0.37
HOXD3-201ENST00000249440 NDC80O14777 642 aa17.34■□□□□ 0.37
HOXD3-201ENST00000249440 TCF4P15884 667 aa17.34■□□□□ 0.37
HOXD3-201ENST00000249440 EFNA5P52803 228 aa17.34■□□□□ 0.37
HOXD3-201ENST00000249440 TARBP2Q15633 366 aaKnown RBP17.34■□□□□ 0.37
HOXD3-201ENST00000249440 SPOCD1Q6ZMY3 1216 aa17.34■□□□□ 0.37
HOXD3-201ENST00000249440 DDX56Q9NY93 547 aaKnown RBP17.34■□□□□ 0.37
HOXD3-201ENST00000249440 DICER1Q9UPY3 1922 aaKnown RBP17.34■□□□□ 0.37
HOXD3-201ENST00000249440 TCRBV5S1A1TA0A578 114 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 F8VP50 259 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 TOM1L1O75674 476 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 UBOX5O94941 541 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 PTPN7P35236 360 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 ZNF252P-AS1Q0IIN9 211 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 SGSM1Q2NKQ1 1148 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 TFDP3Q5H9I0 405 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 MAML1Q92585 1016 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 UBN1Q9NPG3 1134 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 CISHQ9NSE2 258 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 FZD1Q9UP38 647 aa17.33■□□□□ 0.37
HOXD3-201ENST00000249440 FAM47DPA6NHR8 397 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 EIF4BP23588 611 aaKnown RBP17.33■□□□□ 0.36
HOXD3-201ENST00000249440 SLC8A1P32418 973 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 NF2P35240 595 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 TNFSF9P41273 254 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 STAT5BP51692 787 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 IL9RQ01113 521 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 ADCY1Q08828 1119 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 GPS1Q13098 491 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 MORF4L2Q15014 288 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 TMED2Q15363 201 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 DUOXA2Q1HG44 320 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 FAM160B1Q5W0V3 765 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 GLIS1Q8NBF1 620 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 GRAMD1AQ96CP6 724 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 MRPL4Q9BYD3 311 aaKnown RBP17.33■□□□□ 0.36
HOXD3-201ENST00000249440 MTMR12Q9C0I1 747 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 NIF3L1Q9GZT8 377 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 CEP83Q9Y592 693 aa17.33■□□□□ 0.36
HOXD3-201ENST00000249440 LOC285556D6RIA3 1793 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 MAFO75444 373 aaPredicted RBP17.32■□□□□ 0.36
HOXD3-201ENST00000249440 UBA1P22314 1058 aaKnown RBP17.32■□□□□ 0.36
HOXD3-201ENST00000249440 BRD2P25440 801 aaKnown RBP17.32■□□□□ 0.36
HOXD3-201ENST00000249440 MYL6P60660 151 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 CNTN2Q02246 1040 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 FSTL1Q12841 308 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 GALNTL6Q49A17 601 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 ZNF394Q53GI3 561 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 TMEM63BQ5T3F8 832 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 FAM228AQ86W67 206 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 ERICH1Q86X53 443 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 TDRPQ86YL5 185 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 YY1AP1Q9H869 796 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 RNF181Q9P0P0 153 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 hCG_1818297A0A087WSY0 165 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 FAM189A1O60320 539 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 MSCO60682 206 aa17.32■□□□□ 0.36
HOXD3-201ENST00000249440 FARP2O94887 1054 aaPredicted RBP17.32■□□□□ 0.36
HOXD3-201ENST00000249440 ITGAVP06756 1048 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms