RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 USP15Q9Y4E8 981 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 SCINQ9Y6U3 715 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 PHIPQ8WWQ0 1821 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 RASA4BC9J798 803 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 RASA4O43374 803 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 PECAM1P16284 738 aaPredicted RBP27.02■■□□□ 1.92
RAB40C-201ENST00000248139 ELF3P78545 371 aaPredicted RBP27.02■■□□□ 1.92
RAB40C-201ENST00000248139 DCAF15Q66K64 600 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 GPAT2Q6NUI2 795 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 WDTC1Q8N5D0 677 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 SPOCK2Q92563 424 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 VPS33BQ9H267 617 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 AFG3L2Q9Y4W6 797 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 LRRD1A4D1F6 860 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 C1QBPQ07021 282 aaKnown RBP27.02■■□□□ 1.92
RAB40C-201ENST00000248139 SNCBQ16143 134 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 CKAP2Q8WWK9 683 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 CNKSR2Q8WXI2 1034 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 CISHQ9NSE2 258 aa27.02■■□□□ 1.92
RAB40C-201ENST00000248139 DNAJC8O75937 253 aaPredicted RBP27.01■■□□□ 1.91
RAB40C-201ENST00000248139 FOXN2P32314 431 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 KCNJ2P63252 427 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 TFAMQ00059 246 aaKnown RBP27.01■■□□□ 1.91
RAB40C-201ENST00000248139 CGB2Q6NT52 195 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 TRIM72Q6ZMU5 477 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 KIF2BQ8N4N8 673 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 CEP120Q8N960 986 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 CAV1Q03135 178 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 SWT1Q5T5J6 900 aaKnown RBP27.01■■□□□ 1.91
RAB40C-201ENST00000248139 DNAJC24Q6P3W2 148 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 CCDC63Q8NA47 563 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 IP6K2Q9UHH9 426 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 BAIAP2L1Q9UHR4 511 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 TRIM33Q9UPN9 1127 aa27.01■■□□□ 1.91
RAB40C-201ENST00000248139 RGPD3A6NKT7 1758 aaPredicted RBP27■■□□□ 1.91
RAB40C-201ENST00000248139 RGPD4Q7Z3J3 1758 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 GCAP28676 217 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 LY6KQ17RY6 165 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 TBC1D31Q96DN5 1066 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 RMDN2Q96LZ7 410 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 IMPG2Q9BZV3 1241 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 ZWILCHQ9H900 591 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 CHUKO15111 745 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 CDH16O75309 829 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 LDHAP00338 332 aaKnown RBP27■■□□□ 1.91
RAB40C-201ENST00000248139 OAS1P00973 400 aaKnown RBP27■■□□□ 1.91
RAB40C-201ENST00000248139 TBXAS1P24557 533 aaPredicted RBP27■■□□□ 1.91
RAB40C-201ENST00000248139 RAP1GAPP47736 663 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 TREML2Q5T2D2 321 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 ANKMY2Q8IV38 441 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 THNSL1Q8IYQ7 743 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 C4orf33Q8N1A6 199 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 TRPM4Q8TD43 1214 aa27■■□□□ 1.91
RAB40C-201ENST00000248139 NXF1Q9UBU9 619 aaKnown RBP27■■□□□ 1.91
RAB40C-201ENST00000248139 EXOC1LA0A1B0GW35 172 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 ADCY3O60266 1144 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 ATG7O95352 703 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 ASS1P00966 412 aaKnown RBP26.99■■□□□ 1.91
RAB40C-201ENST00000248139 OAZ1P54368 228 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 WDR72Q3MJ13 1102 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 SPOCD1Q6ZMY3 1216 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 VCPIP1Q96JH7 1222 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 ZNF112Q9UJU3 913 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 CNTN6Q9UQ52 1028 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 PIGRP01833 764 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 ZNF132P52740 706 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 P3H4Q92791 437 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 GINM1Q9NU53 330 aa26.99■■□□□ 1.91
RAB40C-201ENST00000248139 ATP5DP30049 168 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 STAT5BP51692 787 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 WDR4P57081 412 aaKnown RBP26.98■■□□□ 1.91
RAB40C-201ENST00000248139 ZCCHC9Q8N567 271 aaKnown RBP26.98■■□□□ 1.91
RAB40C-201ENST00000248139 TRAPPC12Q8WVT3 735 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 VPS37BQ9H9H4 285 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 POLIQ9UNA4 740 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 FARP2O94887 1054 aaPredicted RBP26.98■■□□□ 1.91
RAB40C-201ENST00000248139 TCF7P36402 384 aaPredicted RBP26.98■■□□□ 1.91
RAB40C-201ENST00000248139 NRLP54845 237 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 MGAT5Q09328 741 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 SPATA21Q7Z572 469 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 ZBED8Q8IZ13 594 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 RCOR2Q8IZ40 523 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 FITM2Q8N6M3 262 aa26.98■■□□□ 1.91
RAB40C-201ENST00000248139 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.98■■□□□ 1.91
RAB40C-201ENST00000248139 LCTP09848 1927 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 SGK1O00141 431 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 DNALI1O14645 258 aaPredicted RBP26.97■■□□□ 1.91
RAB40C-201ENST00000248139 PKN2Q16513 984 aaKnown RBP26.97■■□□□ 1.91
RAB40C-201ENST00000248139 RNF149Q8NC42 400 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 NKIRAS1Q9NYS0 192 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 FAM189A1O60320 539 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 MSCO60682 206 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 CSDE1O75534 798 aaKnown RBP26.97■■□□□ 1.91
RAB40C-201ENST00000248139 RFC1P35251 1148 aaPredicted RBP26.97■■□□□ 1.91
RAB40C-201ENST00000248139 CDH8P55286 799 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 ENPEPQ07075 957 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 DENND1BQ6P3S1 775 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 BRSK2Q8IWQ3 736 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 EMC1Q8N766 993 aa26.97■■□□□ 1.91
RAB40C-201ENST00000248139 JOSD2Q8TAC2 188 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms