RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 RTP1P59025 263 aa16.57■□□□□ 0.24
SIN3B-201ENST00000248054 NT5DC4Q86YG4 428 aa16.57■□□□□ 0.24
SIN3B-201ENST00000248054 ACTRT1Q8TDG2 376 aa16.57■□□□□ 0.24
SIN3B-201ENST00000248054 TRIM56Q9BRZ2 755 aaKnown RBP16.57■□□□□ 0.24
SIN3B-201ENST00000248054 MMTAG2Q9BU76 263 aaKnown RBP16.57■□□□□ 0.24
SIN3B-201ENST00000248054 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
SIN3B-201ENST00000248054 TRPV6Q9H1D0 765 aa16.57■□□□□ 0.24
SIN3B-201ENST00000248054 DPP3Q9NY33 737 aa16.57■□□□□ 0.24
SIN3B-201ENST00000248054 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
SIN3B-201ENST00000248054 NPTXRO95502 500 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 PTGER2P43116 358 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 AARSP49588 968 aaKnown RBP eCLIP16.56■□□□□ 0.244e-6■■■■■ 30.6
SIN3B-201ENST00000248054 ESRRGP62508 458 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 RCN2Q14257 317 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 RWDD4Q6NW29 188 aaKnown RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 SV2AQ7L0J3 742 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 ZNF571Q7Z3V5 609 aaPredicted RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 TBK1Q9UHD2 729 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 SIK3Q9Y2K2 1263 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 EFHC1Q5JVL4 640 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 C11orf63Q6NUN7 778 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 SCN4BQ8IWT1 228 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 SPDYE1Q8NFV5 336 aaPredicted RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 CAMKK2Q96RR4 588 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 EPAS1Q99814 870 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 ABHD16BQ9H3Z7 469 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 CREB3O43889 395 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 ADCY3O60266 1144 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 DNAJC8O75937 253 aaPredicted RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 EIF3EP60228 445 aaKnown RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 GTF2BQ00403 316 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 LRRC55Q6ZSA7 311 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 RAPH1Q70E73 1250 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 MYCBPAPQ8TBZ2 947 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 BAG5Q9UL15 447 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 HNRNPCL1O60812 293 aaKnown RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 SGPL1O95470 568 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
SIN3B-201ENST00000248054 ARSEP51690 589 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 ETAA1Q9NY74 926 aa16.56■□□□□ 0.24
SIN3B-201ENST00000248054 YDJCA8MPS7 323 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 ADM5C9JUS6 153 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 CLCN3P51790 818 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 BYSLQ13895 437 aaKnown RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 GNASQ5JWF2 1037 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 REPS2Q8NFH8 660 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 SEC16BQ96JE7 1060 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 ERP44Q9BS26 406 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 KBTBD13C9JR72 458 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 ITGB3P05106 788 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 GPD1P21695 349 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 RFC1P35251 1148 aaPredicted RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 GSCP56915 257 aaPredicted RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 ERVK-9P63128 1117 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 JAMLQ86YT9 394 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 CRLF3Q8IUI8 442 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 TAS1R2Q8TE23 839 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 CHMP6Q96FZ7 201 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 DDX27Q96GQ7 796 aaKnown RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 STOML1Q9UBI4 398 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 G3BP2Q9UN86 482 aaKnown RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 FAF1Q9UNN5 650 aaPredicted RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 AP1G2O75843 785 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 APOEP02649 317 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 BTBD8Q5XKL5 378 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 ZNF662Q6ZS27 426 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 RASA4BC9J798 803 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 RASA4O43374 803 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 WEE2P0C1S8 567 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 MAGOHP61326 146 aaKnown RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 JADE1Q6IE81 842 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 WDR75Q8IWA0 830 aaKnown RBP16.55■□□□□ 0.24
SIN3B-201ENST00000248054 LACRTQ9GZZ8 138 aa16.55■□□□□ 0.24
SIN3B-201ENST00000248054 H3BRB1 525 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 AGTP01019 485 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 STMN1P16949 149 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 PRKCIP41743 596 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 MEI1Q5TIA1 1274 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 ZNF410Q86VK4 478 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 VCPIP1Q96JH7 1222 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 FRMD8Q9BZ67 464 aaPredicted RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 ASB7Q9H672 318 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 RAD51CO43502 376 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 RALAP11233 206 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 BOLA3Q53S33 107 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 SLC13A5Q86YT5 568 aaPredicted RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 PORCNQ9H237 461 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 MRPL40Q9NQ50 206 aaKnown RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 ACKR2O00590 384 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 LCP1P13796 627 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 NFKBIAP25963 317 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 FKBP1BP68106 108 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 RNF180Q86T96 592 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 EGFL6Q8IUX8 553 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms