RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TMEM191CA6NGB0 347 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 TTLL13PA6NNM8 815 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 TMEM191BP0C7N4 346 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 CETN2P41208 172 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 ZNF132P52740 706 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 CAPSQ13938 189 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 CYP4F22Q6NT55 531 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 PPP1R2P3Q6NXS1 205 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 MFSD7Q6UXD7 560 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 LBX2Q6XYB7 198 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 ZCCHC9Q8N567 271 aaKnown RBP15.22■□□□□ 0.03
HIF3A-202ENST00000244303 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 MCEEQ96PE7 176 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 IMPG2Q9BZV3 1241 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 BTBD7Q9P203 1132 aa15.22■□□□□ 0.03
HIF3A-202ENST00000244303 WDR90Q96KV7 1748 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 KRT1P04264 644 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 ZSCAN5DPP0CG00 497 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 MAGEA4P43358 317 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 STAT4Q14765 748 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 FAM228AQ86W67 206 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 CEP57Q86XR8 500 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 UBR7Q8N806 425 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 RBM41Q96IZ5 413 aaKnown RBP15.21■□□□□ 0.03
HIF3A-202ENST00000244303 NIFKQ9BYG3 293 aaKnown RBP15.21■□□□□ 0.03
HIF3A-202ENST00000244303 TMEM134Q9H6X4 195 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 EURLQ9NYK6 297 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.03
HIF3A-202ENST00000244303 IVNS1ABPQ9Y6Y0 642 aa15.21■□□□□ 0.03
HIF3A-202ENST00000244303 F8VP50 259 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 DDNO94850 711 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 STX2P32856 288 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ELF3P78545 371 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 LMNB2Q03252 620 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 NEDD9Q14511 834 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 TMED2Q15363 201 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ZKSCAN8Q15776 578 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ZNF394Q53GI3 561 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 TMEM63BQ5T3F8 832 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 CCDC77Q9BR77 488 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ZNF148Q9UQR1 794 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 IGKV6D-21A0A0A0MT36 114 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 DNALI1O14645 258 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ADCY3O60266 1144 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 MGRN1O60291 552 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 UBOX5O94941 541 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ETS1P14921 441 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ALDH5A1P51649 535 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 OGDHQ02218 1023 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ARHGEF18Q6ZSZ5 1173 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ZBTB33Q86T24 672 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 RPAINQ86UA6 219 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 BRSK2Q8IWQ3 736 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 CCDC63Q8NA47 563 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-202ENST00000244303 PCYT2Q99447 389 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 SAYSD1Q9NPB0 183 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 AGAP1Q9UPQ3 857 aa15.2■□□□□ 0.02
HIF3A-202ENST00000244303 TCRBV5S1A1TA0A578 114 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 SUN1O94901 812 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 TJP3O95049 919 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 CALB1P05937 261 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 UBA1P22314 1058 aaKnown RBP15.19■□□□□ 0.02
HIF3A-202ENST00000244303 ARSEP51690 589 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 MYL6P60660 151 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 EAPPQ56P03 285 aaPredicted RBP15.19■□□□□ 0.02
HIF3A-202ENST00000244303 TXNRD3NBQ6F5E7 133 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 DNAJC24Q6P3W2 148 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 SPOCD1Q6ZMY3 1216 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 RIOX2Q8IUF8 465 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 HAUS1Q96CS2 278 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 CSADQ9Y600 493 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 RASA4BC9J798 803 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 ADM5C9JUS6 153 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 RASA4O43374 803 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 FAM189A1O60320 539 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 ABHD2P08910 425 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 RFC5P40937 340 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 TARBP2Q15633 366 aaKnown RBP15.19■□□□□ 0.02
HIF3A-202ENST00000244303 DRICH1Q6PGQ1 229 aaPredicted RBP15.19■□□□□ 0.02
HIF3A-202ENST00000244303 DCUN1D2Q6PH85 259 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 SPATA21Q7Z572 469 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 WDR49Q8IV35 697 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 ALLCQ8N6M5 410 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 CCHCR1Q8TD31 782 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 TACO1Q9BSH4 297 aaKnown RBP15.19■□□□□ 0.02
HIF3A-202ENST00000244303 TCHPQ9BT92 498 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 FOXP3Q9BZS1 431 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 NKIRAS1Q9NYS0 192 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 ACTL7BQ9Y614 415 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.19■□□□□ 0.02
HIF3A-202ENST00000244303 ANK1P16157 1881 aa15.19■□□□□ 0.02
HIF3A-202ENST00000244303 EXOC1LA0A1B0GW35 172 aa15.18■□□□□ 0.02
HIF3A-202ENST00000244303 SOWAHBA6NEL2 793 aa15.18■□□□□ 0.02
HIF3A-202ENST00000244303 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms