RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 SSU72Q9NP77 194 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 SEPT9Q9UHD8 586 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 LRRIQ4A6NIV6 560 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 PI4K2BG5E9Z4 385 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ALOX15BO15296 676 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ETS1P14921 441 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 RNASELQ05823 741 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 MTMR1Q13613 665 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 PPP1R21Q6ZMI0 780 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 CCDC89Q8N998 374 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 FAM13CQ8NE31 585 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 WNK4Q96J92 1243 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 RMDN3Q96TC7 470 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 MIPEPQ99797 713 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 LNPEPQ9UIQ6 1025 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 DENND3A2RUS2 1198 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 RASA4BC9J798 803 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 RASA4O43374 803 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 GAS8O95995 478 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 IFNB1P01574 187 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 EDN1P05305 212 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 GARTP22102 1010 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 STX2P32856 288 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 PSMC5P62195 406 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 OGDHQ02218 1023 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 LMNB2Q03252 620 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 CBLBQ13191 982 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ORC1Q13415 861 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 ZBTB33Q86T24 672 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 PITPNM3Q9BZ71 974 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 TBC1D22BQ9NU19 505 aa12.64□□□□□ -0.39
SEC61A1-201ENST00000243253 A0A1W2PPM1 405 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 RGS20O76081 388 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 CDC25CP30307 473 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 CLNS1AP54105 237 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 RTP1P59025 263 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 DYNLT1P63172 113 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 DNAJC3Q13217 504 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 GSTA5Q7RTV2 222 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 RHOT1Q8IXI2 618 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 KIFAP3Q92845 792 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 RNF19AQ9NV58 838 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 FETUBQ9UGM5 382 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ADGRA2Q96PE1 1338 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 PECAM1P16284 738 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ATP2A2P16615 1042 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ERFP50548 548 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 RPL7AP62424 266 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ABRAQ8N0Z2 381 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 GPD1LQ8N335 351 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 SH3TC2Q8TF17 1288 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 TMEM143Q96AN5 459 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ZBTB10Q96DT7 871 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 PLVAPQ9BX97 442 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 KCNK13Q9HB14 408 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ZNF70Q9UC06 446 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 DRG1Q9Y295 367 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ZBED4O75132 1171 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 C1QAP02745 245 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 GAD2Q05329 585 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 PSMD6Q15008 389 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 TAZQ16635 292 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 EFHC2Q5JST6 749 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 OTOAQ7RTW8 1153 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 C17orf75Q9HAS0 396 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 RNPEPL1Q9HAU8 725 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 ETNK1Q9HBU6 452 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 KLHL14Q9P2G3 628 aa12.63□□□□□ -0.39
SEC61A1-201ENST00000243253 CNTNAP2Q9UHC6 1331 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 DOCK1Q14185 1865 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 TMEM191CA6NGB0 347 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 FAM189A1O60320 539 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 TMEM191BP0C7N4 346 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 ATF7P17544 494 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 GCKP35557 465 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 RPS6P62753 249 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 MAPK6Q16659 721 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 MSS51Q4VC12 460 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 BRDTQ58F21 947 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 SWSAP1Q6NVH7 229 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 NLRX1Q86UT6 975 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 BBOF1Q8ND07 529 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 FAM136AQ96C01 138 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 ANKRD27Q96NW4 1050 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 CYP39A1Q9NYL5 469 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 E7ESA3 106 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 SPAG7O75391 227 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 CALB2P22676 271 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms