RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 EVX2Q03828 476 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 SPARCL1Q14515 664 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 SLC5A9Q2M3M2 681 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 DAB2IPQ5VWQ8 1189 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 FAM228AQ86W67 206 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 DTX3LQ8TDB6 740 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 L3MBTL3Q96JM7 780 aaPredicted RBP11.54□□□□□ -0.56
COPA-201ENST00000241704 PNMA5Q96PV4 448 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 TMEM8AQ9HCN3 771 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 TBX20Q9UMR3 447 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 MAGED2Q9UNF1 606 aaPredicted RBP11.54□□□□□ -0.56
COPA-201ENST00000241704 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 A0A087X0B3 334 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 FAM86B1E9PN63 330 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 FAM86B2P0C5J1 330 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 SAT1P21673 171 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 DARS2Q6PI48 645 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 MTHFD1LQ6UB35 978 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 LRRC71Q8N4P6 559 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 NDE1Q9NXR1 346 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 SLC12A4Q9UP95 1085 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 VWA5AO00534 786 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 TARSP26639 723 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 TCF7P36402 384 aaPredicted RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 YWHAGP61981 247 aaKnown RBP eCLIP11.53□□□□□ -0.56
COPA-201ENST00000241704 SLC29A2Q14542 456 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 PPP6R3Q5H9R7 873 aaPredicted RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 EFCAB12Q6NXP0 572 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 C4orf19Q8IY42 314 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 CYP2W1Q8TAV3 490 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 SPATA20Q8TB22 786 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 ATXN2LQ8WWM7 1075 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 CYTH2Q99418 400 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 SYT17Q9BSW7 474 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 SPATC1LQ9H0A9 340 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 WNT8AQ9H1J5 351 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 AGO4Q9HCK5 861 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 ARHGAP42A6NI28 874 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 I3L4J1 428 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 ZNF189O75820 626 aaPredicted RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 THPOP40225 353 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 OAZ1P54368 228 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 GALCP54803 685 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 RCN1Q15293 331 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 TMED2Q15363 201 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 KIAA1755Q5JYT7 1200 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 MEI1Q5TIA1 1274 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 SRRM1Q8IYB3 904 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 SNRNP27Q8WVK2 155 aaKnown RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 TNIP3Q96KP6 325 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 TTC1Q99614 292 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 ROPN1BQ9BZX4 212 aaPredicted RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 ROPN1Q9HAT0 212 aaPredicted RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 ASNSD1Q9NWL6 643 aa11.53□□□□□ -0.56
COPA-201ENST00000241704 ZNF142P52746 1687 aaPredicted RBP11.53□□□□□ -0.56
COPA-201ENST00000241704 FOXP2O15409 715 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 HAUS5O94927 633 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 ITGA4P13612 1032 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 FUT2Q10981 343 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 WDR72Q3MJ13 1102 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 EPM2AIP1Q7L775 607 aaPredicted RBP11.52□□□□□ -0.56
COPA-201ENST00000241704 ZNF572Q7Z3I7 529 aaPredicted RBP11.52□□□□□ -0.56
COPA-201ENST00000241704 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 YAF2Q8IY57 180 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 SCFD1Q8WVM8 642 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 PGM2Q96G03 612 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 MTMR9Q96QG7 549 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 ZWILCHQ9H900 591 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 STARD7Q9NQZ5 370 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 GALNT8Q9NY28 637 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 STAP1Q9ULZ2 295 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 TMCO1Q9UM00 188 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 PCDHAC2Q9Y5I4 1007 aa11.52□□□□□ -0.56
COPA-201ENST00000241704 EXTL3O43909 919 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 SPAG7O75391 227 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 ZCCHC18P0CG32 403 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 FGFR4P22455 802 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.57
COPA-201ENST00000241704 MAGEA8P43361 318 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 AP2B1P63010 937 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 NCOA4Q13772 614 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 TMEM119Q4V9L6 283 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 NIPA1Q7RTP0 329 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.52□□□□□ -0.571e-6■■■■□ 23
COPA-201ENST00000241704 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 CELF4Q9BZC1 486 aaKnown RBP11.52□□□□□ -0.57
COPA-201ENST00000241704 OLFML3Q9NRN5 406 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 WDR35Q9P2L0 1181 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 CTNNAL1Q9UBT7 734 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 IP6K2Q9UHH9 426 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 HAO1Q9UJM8 370 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.57
COPA-201ENST00000241704 ARHGAP10A1A4S6 786 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 C17orf102A2RUQ5 167 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 PJA2O43164 708 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 TBC1D12O60347 775 aa11.52□□□□□ -0.57
COPA-201ENST00000241704 LINGO3P0C6S8 592 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms