RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 RSRC2Q7L4I2 434 aaKnown RBP16.19■□□□□ 0.18
HDHD3-201ENST00000238379 PEX26Q7Z412 305 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 TRIM11Q96F44 468 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 VCPIP1Q96JH7 1222 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 CAPZA3Q96KX2 299 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 GAD1Q99259 594 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 NUP85Q9BW27 656 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 SEZ6LQ9BYH1 1024 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 UVRAGQ9P2Y5 699 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 OGDHLQ9ULD0 1010 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 GIT1Q9Y2X7 761 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 PDE2AO00408 941 aaPredicted RBP16.19■□□□□ 0.18
HDHD3-201ENST00000238379 SPTLC1O15269 473 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 KIF4AO95239 1232 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 CCL5P13501 91 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 CD19P15391 556 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 HSPA6P17066 643 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 ATF7P17544 494 aaPredicted RBP16.19■□□□□ 0.18
HDHD3-201ENST00000238379 MMP8P22894 467 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 RRM1P23921 792 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 LRPAP1P30533 357 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 PNPLA4P41247 253 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 RAB27AP51159 221 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 RPS6KA1Q15418 735 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 WDTC1Q8N5D0 677 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 ADAM2Q99965 735 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 ZNF518BQ9C0D4 1074 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 GDAP2Q9NXN4 497 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 CTAGE15A4D2H0 777 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 ARL5CA6NH57 179 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 KPNA7A9QM74 516 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 CTAGE8P0CG41 777 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
HDHD3-201ENST00000238379 SOWAHAQ2M3V2 549 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 C2CD6Q53TS8 623 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 C11orf63Q6NUN7 778 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 CTAGE6Q86UF2 777 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 CTAGE4Q8IX94 777 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 FAM126BQ8IXS8 530 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 TMEM35BQ8NCS4 154 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 ZNF564Q8TBZ8 553 aaPredicted RBP16.18■□□□□ 0.18
HDHD3-201ENST00000238379 UBXN4Q92575 508 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 HES6Q96HZ4 224 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 MRPL45Q9BRJ2 306 aaKnown RBP16.18■□□□□ 0.18
HDHD3-201ENST00000238379 C11orf70Q9BRQ4 267 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 RNF208Q9H0X6 261 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 LHX5Q9H2C1 402 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 SLC38A7Q9NVC3 462 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 MIOSQ9NXC5 875 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 ADAM22Q9P0K1 906 aa16.18■□□□□ 0.18
HDHD3-201ENST00000238379 MED7O43513 233 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 VDRP11473 427 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 TAF6P49848 677 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 CKAP4Q07065 602 aaKnown RBP16.17■□□□□ 0.18
HDHD3-201ENST00000238379 PTPROQ16827 1216 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 DENND1BQ6P3S1 775 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 MMS22LQ6ZRQ5 1243 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 LIMS2Q7Z4I7 341 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 C1orf131Q8NDD1 294 aaKnown RBP16.17■□□□□ 0.18
HDHD3-201ENST00000238379 CAGE1Q8TC20 777 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 ZNF560Q96MR9 790 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 NT5C1AQ9BXI3 368 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 AMFRQ9UKV5 643 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 NME7Q9Y5B8 376 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 ALG6Q9Y672 507 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 THP07101 528 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 DNA2P51530 1060 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 ELF2Q15723 593 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 LIN9Q5TKA1 542 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 LLGL2Q6P1M3 1020 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 GOLGA1Q92805 767 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 HEXIM2Q96MH2 286 aaKnown RBP16.17■□□□□ 0.18
HDHD3-201ENST00000238379 RPS6KC1Q96S38 1066 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 KIAA1257Q9ULG3 409 aa16.17■□□□□ 0.18
HDHD3-201ENST00000238379 O00370 1275 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 SKIP12755 728 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 LILRA4P59901 499 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 MESDQ14696 234 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 CNGA2Q16280 664 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 SV2CQ496J9 727 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 PLEKHA7Q6IQ23 1121 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 ZNF572Q7Z3I7 529 aaPredicted RBP16.16■□□□□ 0.18
HDHD3-201ENST00000238379 RTN4RL1Q86UN2 441 aaPredicted RBP16.16■□□□□ 0.18
HDHD3-201ENST00000238379 KBTBD7Q8WVZ9 684 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
HDHD3-201ENST00000238379 RSAD1Q9HA92 442 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.16■□□□□ 0.18
HDHD3-201ENST00000238379 CEP83Q9Y592 693 aa16.16■□□□□ 0.18
HDHD3-201ENST00000238379 CES2O00748 559 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 KCNK3O14649 394 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 SELPP16109 830 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 SCNN1GP51170 649 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 MAMLD1Q13495 774 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 SGO2Q562F6 1265 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 TEX35Q5T0J7 233 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 LRRC8DQ7L1W4 858 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 PHLDB2Q86SQ0 1253 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 ZNF598Q86UK7 904 aaKnown RBP16.15■□□□□ 0.18
HDHD3-201ENST00000238379 UNC93AQ86WB7 457 aa16.15■□□□□ 0.18
HDHD3-201ENST00000238379 ECHDC2Q86YB7 292 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms