RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SMYD3Q9H7B4 428 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 ITIH6Q6UXX5 1313 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 MYH11P35749 1972 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 SYN3O14994 580 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 ORC1Q13415 861 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 ZNF598Q86UK7 904 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 CASD1Q96PB1 797 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 FOXN3O00409 490 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 MFAP3LO75121 409 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 CA3P07451 260 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 LRPAP1P30533 357 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 MAGEA1P43355 309 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 GOLGA8FQ08AF8 430 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 GOLGA8DPQ0D2H9 430 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 IFI16Q16666 785 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 PLPP4Q5VZY2 271 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 ARHGEF19Q8IW93 802 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 SEMA4DQ92854 862 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 FAM149B1Q96BN6 582 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 DDHD2O94830 711 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 ADH1AP07327 375 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 KIF5AQ12840 1032 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 UNC93AQ86WB7 457 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 PASD1Q8IV76 773 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 PLAGL2Q9UPG8 496 aa11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 TRIP12Q14669 1992 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-201ENST00000237289 ABLIM1O14639 778 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 FGF18O76093 207 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 VDRP11473 427 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 TIGD5Q53EQ6 642 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 MDH1BQ5I0G3 518 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 TRAF7Q6Q0C0 670 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 RSRC2Q7L4I2 434 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 ERICH1Q86X53 443 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 COLGALT1Q8NBJ5 622 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 PLEKHO2Q8TD55 490 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 CYFIP2Q96F07 1278 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 GAS2L1Q99501 681 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 MYO6Q9UM54 1294 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 LRG1P02750 347 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 FAM200BP0CF97 657 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 C9orf50Q5SZB4 431 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 LINC01599Q8WXQ3 324 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 TIFAQ96CG3 184 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 IGSF21Q96ID5 467 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 NKX2-4Q9H2Z4 354 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 CYP4F11Q9HBI6 524 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 PCDHB5Q9Y5E4 795 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 MRPL42Q9Y6G3 142 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 OR6C75A6NL08 312 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 ABCB4P21439 1286 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 RNF34Q969K3 372 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 TCF25Q9BQ70 676 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 CDH9Q9ULB4 789 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 MAGED2Q9UNF1 606 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 PCDHA11Q9Y5I1 949 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 CCDC175P0C221 793 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 BMPR1AP36894 532 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 SOX4Q06945 474 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 UPP1Q16831 310 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 SLC39A12Q504Y0 691 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 OR6B2Q6IFH4 312 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 COLGALT2Q8IYK4 626 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 PGLYRP2Q96PD5 576 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 MYO1AQ9UBC5 1043 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 ADAMTS1Q9UHI8 967 aa11.83□□□□□ -0.52
TNFAIP3-201ENST00000237289 TYMPP19971 482 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 RNASE9P60153 205 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 PHLDB3Q6NSJ2 640 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 TRIM72Q6ZMU5 477 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 SUSD3Q96L08 255 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 SLITRK6Q9H5Y7 841 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 COQ4Q9Y3A0 265 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 A0A1W2PQJ5 194 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 PPEF2O14830 753 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 AP1G2O75843 785 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 RB1P06400 928 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 BRD2P25440 801 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 OR1D2P34982 312 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 RPL10AP62906 217 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 APBA1Q02410 837 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZNF830Q96NB3 372 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 OXCT2Q9BYC2 517 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 ALG13Q9NP73 1137 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 ABHD10Q9NUJ1 306 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms