RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TJAP1Q5JTD0 557 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 TCHHL1Q5QJ38 904 aaPredicted RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 RASSF5Q8WWW0 418 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 UTYO14607 1347 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 EDF1O60869 148 aaKnown RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 PLEKHA8P1O95397 391 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 PRLP01236 227 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 ANTXR2P58335 489 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 ZNF423Q2M1K9 1284 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 SRBD1Q8N5C6 995 aaKnown RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 ZNF555Q8NEP9 628 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 TAMM41Q96BW9 452 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 AGPAT1Q99943 283 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 CADM1Q9BY67 442 aaKnown RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 WDR12Q9GZL7 423 aaKnown RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 MEI4A8MW99 385 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 THRAP10827 490 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 TXNRD1Q16881 649 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 CCSAPQ6IQ19 270 aaPredicted RBP13.46□□□□□ -0.26
VAMP4-201ENST00000236192 CLNKQ7Z7G1 428 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 SLFN12Q8IYM2 578 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 CYP4X1Q8N118 509 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 RMDN1Q96DB5 314 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 GCOM2Q9BZD3 368 aaPredicted RBP13.46□□□□□ -0.26
VAMP4-201ENST00000236192 KCNK4Q9NYG8 393 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 LNPEPQ9UIQ6 1025 aa13.46□□□□□ -0.26
VAMP4-201ENST00000236192 RAD51BO15315 384 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 NAT1P18440 290 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 ZBTB49Q6ZSB9 765 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 NT5C1BQ96P26 610 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TMEM109Q9BVC6 243 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 PNPLA3Q9NST1 481 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 BAG5Q9UL15 447 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 SNX13Q9Y5W8 968 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 NFIBO00712 420 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 SIN3BO75182 1162 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 EIF2AK2P19525 551 aaKnown RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 CDC16Q13042 620 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TRIM60Q495X7 471 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 BSPRYQ5W0U4 402 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 LPCAT4Q643R3 524 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 DUPD1Q68J44 220 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 GABPB2Q8TAK5 448 aaPredicted RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 GLMNQ92990 594 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 GPCPD1Q9NPB8 672 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 PCDH12Q9NPG4 1184 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 IPPQ9Y573 584 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 FAM205CA6NFA0 338 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 USP1O94782 785 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 SERPINB2P05120 415 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TAC1P20366 129 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 BGNP21810 368 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 COMTP21964 271 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 DYNLT1P63172 113 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 DGUOKQ16854 277 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 SPIRE2Q8WWL2 714 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 C1orf112Q9NSG2 853 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 ARHGEF35A5YM69 484 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 H0YC42 278 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 PLA2G4BP0C869 781 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 PABPC4LP0CB38 370 aaKnown RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TCN1P20061 433 aaPredicted RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 FDFT1P37268 417 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 SLC1A1P43005 524 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 ACSBG2Q5FVE4 666 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 RFWD3Q6PCD5 774 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 DARS2Q6PI48 645 aaKnown RBP13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TTC30AQ86WT1 665 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TTC13Q8NBP0 860 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 CEP44Q9C0F1 390 aa13.45□□□□□ -0.26
VAMP4-201ENST00000236192 TBC1D4O60343 1298 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 CCNA2P20248 432 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 ITGA6P23229 1130 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 SLC5A3P53794 718 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 PRPSAP1Q14558 356 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 RAPH1Q70E73 1250 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 FBXL16Q8N461 479 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 MINDY2Q8NBR6 621 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 SHCBP1LQ9BZQ2 653 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 NINJ2Q9NZG7 142 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 STK39Q9UEW8 545 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 SORCS3Q9UPU3 1222 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 RNF225M0QZC1 329 aaPredicted RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 ADORA1P30542 326 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 BCAP31P51572 246 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 PFKFB3Q16875 520 aaPredicted RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 NAALADL2Q58DX5 795 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 CCDC127Q96BQ5 260 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 WNK4Q96J92 1243 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms