RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 CPSF3Q9UKF6 684 aaKnown RBP10.47□□□□□ -0.73
TTC1-201ENST00000231238 GUCA1BQ9UMX6 200 aa10.47□□□□□ -0.73
TTC1-201ENST00000231238 DCDC2BA2VCK2 349 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 KBTBD13C9JR72 458 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 GPR32O75388 356 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 CTSHP09668 335 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 IQCF3P0C7M6 154 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 PNMA6AP0CW24 399 aaPredicted RBP10.46□□□□□ -0.74
TTC1-201ENST00000231238 TNFAIP3P21580 790 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 CST5P28325 142 aaPredicted RBP10.46□□□□□ -0.74
TTC1-201ENST00000231238 MRPS6P82932 125 aaKnown RBP10.46□□□□□ -0.74
TTC1-201ENST00000231238 SNX17Q15036 470 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 PTGISQ16647 500 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 ZACNQ401N2 412 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 C1orf53Q5VUE5 145 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 TDRD10Q5VZ19 366 aaKnown RBP10.46□□□□□ -0.74
TTC1-201ENST00000231238 GDF6Q6KF10 455 aaPredicted RBP10.46□□□□□ -0.74
TTC1-201ENST00000231238 LRRC69Q6ZNQ3 347 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 CEP120Q8N960 986 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 SEMA4DQ92854 862 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.74
TTC1-201ENST00000231238 PI4K2AQ9BTU6 479 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 APOL6Q9BWW8 343 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 CELF4Q9BZC1 486 aaKnown RBP10.46□□□□□ -0.74
TTC1-201ENST00000231238 MTMR12Q9C0I1 747 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 PDCL3Q9H2J4 239 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 PTPRHQ9HD43 1115 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 COQ4Q9Y3A0 265 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 PAXBP1Q9Y5B6 917 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 PCDHA13Q9Y5I0 950 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 TRPV2Q9Y5S1 764 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 PTCH2Q9Y6C5 1203 aa10.46□□□□□ -0.74
TTC1-201ENST00000231238 SIP14410 1827 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 A0A1B0GUA9 196 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 C4BPAP04003 597 aaKnown RBP10.45□□□□□ -0.74
TTC1-201ENST00000231238 TBXAS1P24557 533 aaPredicted RBP10.45□□□□□ -0.74
TTC1-201ENST00000231238 ANXA13P27216 316 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 THPOP40225 353 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 PDE6CP51160 858 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 VAV2P52735 878 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 ACLYP53396 1101 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 JAM2P57087 298 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 ETF1P62495 437 aaKnown RBP10.45□□□□□ -0.74
TTC1-201ENST00000231238 ADAM17P78536 824 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 GFPT1Q06210 699 aaPredicted RBP10.45□□□□□ -0.74
TTC1-201ENST00000231238 ITGA7Q13683 1181 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 TMEM132DQ14C87 1099 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 ZNF569Q5MCW4 686 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 TWF2Q6IBS0 349 aaKnown RBP10.45□□□□□ -0.74
TTC1-201ENST00000231238 TRAPPC11Q7Z392 1133 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 HACE1Q8IYU2 909 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 KLHDC9Q8NEP7 349 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 OR5B17Q8NGF7 314 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 LMO3Q8TAP4 145 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 ADAMTS1Q9UHI8 967 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 AJAP1Q9UKB5 411 aaPredicted RBP10.45□□□□□ -0.74
TTC1-201ENST00000231238 CDY2AQ9Y6F7 541 aa10.45□□□□□ -0.74
TTC1-201ENST00000231238 LACTBL1A8MY62 500 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 FOXN3O00409 490 aaPredicted RBP10.44□□□□□ -0.74
TTC1-201ENST00000231238 ABLIM1O14639 778 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 B4GALT4O60513 344 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 RPS6KA5O75582 802 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 IGFBP4P22692 258 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 WEE1P30291 646 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 PRKCIP41743 596 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 YWHAEP62258 255 aaKnown RBP10.44□□□□□ -0.74
TTC1-201ENST00000231238 NOP14P78316 857 aaKnown RBP10.44□□□□□ -0.74
TTC1-201ENST00000231238 NKX3-2P78367 333 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 ELOAQ14241 798 aaKnown RBP10.44□□□□□ -0.74
TTC1-201ENST00000231238 SLC18A3Q16572 532 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 SGSM1Q2NKQ1 1148 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 ZNF699Q32M78 642 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 C10orf76Q5T2E6 689 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 HGSNATQ68CP4 663 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 IRF2BP2Q7Z5L9 587 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 CD302Q8IX05 232 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 ALDH16A1Q8IZ83 802 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 SH3TC2Q8TF17 1288 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 U2AF1L4Q8WU68 220 aaKnown RBP10.44□□□□□ -0.74
TTC1-201ENST00000231238 FAM84AQ96KN4 292 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.44□□□□□ -0.74
TTC1-201ENST00000231238 ASB7Q9H672 318 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 STARD7Q9NQZ5 370 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 PARP2Q9UGN5 583 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 PCDHB4Q9Y5E5 795 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 PTPRJQ12913 1337 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 MROH7Q68CQ1 1323 aa10.44□□□□□ -0.74
TTC1-201ENST00000231238 MACROD2A1Z1Q3 448 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 KHNYNO15037 678 aaKnown RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 FAM189A1O60320 539 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 FAM157BP0CG42 384 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 P4HA1P13674 534 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 ZSCAN20P17040 1043 aaPredicted RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 IBSPP21815 317 aaPredicted RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 BPIFB4P59827 614 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 POU5F1Q01860 360 aaKnown RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 GCNT1Q02742 428 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms