RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 DDX3YO15523 660 aaKnown RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 CIB2O75838 187 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 TPBGLP0DKB5 382 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 SP100P23497 879 aaPredicted RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 SREBF1P36956 1147 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 SNX16P57768 344 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 THOC5Q13769 683 aaKnown RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 ZCWPW2Q504Y3 356 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 MOXD1Q6UVY6 613 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 MMADHCQ9H3L0 296 aaPredicted RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 DCLRE1BQ9H816 532 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 NMRK1Q9NWW6 199 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 ANAPC7Q9UJX3 599 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 XIRP1Q702N8 1843 aaKnown RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 RNF8O76064 485 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 HAUS5O94927 633 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 TTC4O95801 387 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 PGK2P07205 417 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 FMO5P49326 533 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 NLRP9Q7RTR0 991 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 RBBP8NLQ8NC74 664 aaPredicted RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 SYTL5Q8TDW5 730 aaPredicted RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 COG5Q9UP83 839 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 NUB1Q9Y5A7 615 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 GOLGA8IPA6NC78 632 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 GOLGA8JA6NMD2 632 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 STRNO43815 780 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 KPNB1Q14974 876 aaKnown RBP12.13□□□□□ -0.47
CCND1-201ENST00000227507 MTFR1Q15390 333 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 VSTM1Q6UX27 236 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 MAIP1Q8WWC4 291 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 MAML1Q92585 1016 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 GRAMD1AQ96CP6 724 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 SNF8Q96H20 258 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 RILPQ96NA2 401 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■□□□ 14.3
CCND1-201ENST00000227507 VCX3BQ9H321 246 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 EPB41L4BQ9H329 900 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 VCX3AQ9NNX9 186 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 KLHL11Q9NVR0 708 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 LRFN2Q9ULH4 789 aa12.13□□□□□ -0.47
CCND1-201ENST00000227507 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 M0R2N6 131 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 ATP2A1O14983 1001 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 CYP2C8P10632 490 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 KHDC1Q4VXA5 237 aaKnown RBP12.12□□□□□ -0.47
CCND1-201ENST00000227507 IZUMO3Q5VZ72 239 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 SESTD1Q86VW0 696 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 TRIM42Q8IWZ5 723 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 SYT2Q8N9I0 419 aaPredicted RBP12.12□□□□□ -0.47
CCND1-201ENST00000227507 C2orf40Q9H1Z8 148 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 KCTD10Q9H3F6 313 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCND1-201ENST00000227507 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
CCND1-201ENST00000227507 ITGB4P16144 1822 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 CYP26A1O43174 497 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 FGRP09769 529 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 RARBP10826 455 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 FOXN2P32314 431 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 ANKMY2Q8IV38 441 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 TTC17Q96AE7 1141 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
CCND1-201ENST00000227507 PDCD2LQ9BRP1 358 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
CCND1-201ENST00000227507 PDXKO00764 312 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 LPXNO60711 386 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 PEX11AO75192 247 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 ATP6V1G1O75348 118 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 DGAT1O75907 488 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 LAMC2Q13753 1193 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 DEFB115Q30KQ5 88 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 RFWD3Q6PCD5 774 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 SLC5A5Q92911 643 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 FERMT1Q9BQL6 677 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 SH2D3AQ9BRG2 576 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 KATNAL1Q9BW62 490 aa12.12□□□□□ -0.47
CCND1-201ENST00000227507 A0A0A6YYK5 440 aaPredicted RBP12.11□□□□□ -0.47
CCND1-201ENST00000227507 TLR3O15455 904 aaKnown RBP12.11□□□□□ -0.47
CCND1-201ENST00000227507 SLC26A4O43511 780 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 TAC1P20366 129 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 KDSRQ06136 332 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 TTC16Q8NEE8 873 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 ANKRD36BP1Q96IX9 119 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 CLMNQ96JQ2 1002 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
CCND1-201ENST00000227507 KITP10721 976 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 DAB2IPQ5VWQ8 1189 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 LVRNQ6Q4G3 990 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 HAS1Q92839 578 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 MSTO1Q9BUK6 570 aa12.11□□□□□ -0.47
CCND1-201ENST00000227507 SLC38A10Q9HBR0 1119 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms