RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TRAFD1O14545 582 aaPredicted RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 PLSCR1O15162 318 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 ETS1P14921 441 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 MAGEA4P43358 317 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 HADHBP55084 474 aaKnown RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 BPIFB4P59827 614 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 PCNX4Q63HM2 1172 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 NOP9Q86U38 636 aaKnown RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 SLC47A2Q86VL8 602 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 ZSWIM2Q8NEG5 633 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 PRMT6Q96LA8 375 aaPredicted RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 SMC6Q96SB8 1091 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 LXNQ9BS40 222 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 ZNF577Q9BSK1 485 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 TLE6Q9H808 572 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 VPS37BQ9H9H4 285 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 KLHL11Q9NVR0 708 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 CLIC5Q9NZA1 410 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 GOLGA8SH3BPF8 625 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 GOLGA8MH3BSY2 632 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 CCDC22O60826 627 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 ATP6V1G1O75348 118 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 GRIA2P42262 883 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 NR1H3Q13133 447 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 NCAPG2Q86XI2 1143 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 APLFQ8IW19 511 aaPredicted RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 WDR11Q9BZH6 1224 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 ASCC2Q9H1I8 757 aaPredicted RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 WNT8AQ9H1J5 351 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 RANBP17Q9H2T7 1088 aaKnown RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 EBF3Q9H4W6 596 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 CYP26A1O43174 497 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 OPHN1O60890 802 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 KRT4P19013 534 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 RFX1P22670 979 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 NOP14P78316 857 aaKnown RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 MYBPC2Q14324 1141 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 LIN52Q52LA3 116 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 SLC45A4Q5BKX6 768 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 PSPC1Q8WXF1 523 aaKnown RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 PTCD3Q96EY7 689 aaKnown RBP14.87□□□□□ -0.03
SF1-201ENST00000227503 TRAIPQ9BWF2 469 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 SYNCQ9H7C4 482 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 PDP2Q9P2J9 529 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 SLC17A7Q9P2U7 560 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 ATXN10Q9UBB4 475 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 TMX2Q9Y320 296 aa14.87□□□□□ -0.03
SF1-201ENST00000227503 COL2A1P02458 1487 aaPredicted RBP14.86□□□□□ -0.03
SF1-201ENST00000227503 MAGEB2O15479 319 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 GCLMP48507 274 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 P3H1Q32P28 736 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 SATL1Q86VE3 508 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 ANKMY2Q8IV38 441 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 PHF12Q96QT6 1004 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 CYLDQ9NQC7 956 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 STX18Q9P2W9 335 aaKnown RBP14.86□□□□□ -0.03
SF1-201ENST00000227503 CHMP2BQ9UQN3 213 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 C2CD2LO14523 706 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 GGPS1O95749 300 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 MMP10P09238 476 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 PSMC4P43686 418 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 PPP3CAQ08209 521 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 TCEAL1Q15170 157 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 FAM84AQ96KN4 292 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 CCDC77Q9BR77 488 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 TEKT3Q9BXF9 490 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 PPM1HQ9ULR3 514 aa14.86□□□□□ -0.03
SF1-201ENST00000227503 EMSYQ7Z589 1322 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 ARHGEF35A5YM69 484 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 H3BRJ5 948 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 PGM1P36871 562 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 C1orf220Q5T0J3 134 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 RAPH1Q70E73 1250 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 GSTA5Q7RTV2 222 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 ANKS1BQ7Z6G8 1248 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 ALYREFQ86V81 257 aaKnown RBP14.85□□□□□ -0.03
SF1-201ENST00000227503 PLEKHG4BQ96PX9 1271 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.03
SF1-201ENST00000227503 ZNFX1Q9P2E3 1918 aaKnown RBP14.85□□□□□ -0.03
SF1-201ENST00000227503 IPO5O00410 1097 aaKnown RBP14.85□□□□□ -0.03
SF1-201ENST00000227503 PGM3O95394 542 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 FAM200BP0CF97 657 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 BCRP11274 1271 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 ESRRAP11474 423 aaPredicted RBP14.85□□□□□ -0.03
SF1-201ENST00000227503 PTK6Q13882 451 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 FYB2Q5VWT5 728 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 TMEM174Q8WUU8 243 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 SNRNP27Q8WVK2 155 aaKnown RBP14.85□□□□□ -0.03
SF1-201ENST00000227503 NSL1Q96IY1 281 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 DCLK3Q9C098 648 aa14.85□□□□□ -0.03
SF1-201ENST00000227503 HERC5Q9UII4 1024 aaKnown RBP14.85□□□□□ -0.03
SF1-201ENST00000227503 MRPL11Q9Y3B7 192 aaKnown RBP14.85□□□□□ -0.03
SF1-201ENST00000227503 PFDN1O60925 122 aa14.84□□□□□ -0.03
SF1-201ENST00000227503 RALAP11233 206 aa14.84□□□□□ -0.03
SF1-201ENST00000227503 HARSP12081 509 aaKnown RBP14.84□□□□□ -0.03
SF1-201ENST00000227503 SSTR3P32745 418 aaPredicted RBP14.84□□□□□ -0.03
SF1-201ENST00000227503 STAT4Q14765 748 aa14.84□□□□□ -0.03
SF1-201ENST00000227503 CLUL1Q15846 466 aa14.84□□□□□ -0.03
SF1-201ENST00000227503 CC2D2BQ6DHV5 1058 aa14.84□□□□□ -0.03
SF1-201ENST00000227503 PADI6Q6TGC4 694 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms