RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 ARSEP51690 589 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 STAT2P52630 851 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 AP1B1Q10567 949 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 NFX1Q12986 1120 aaKnown RBP16.31■□□□□ 0.2
VTN-201ENST00000226218 MAMLD1Q13495 774 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 OASLQ15646 514 aaKnown RBP16.31■□□□□ 0.2
VTN-201ENST00000226218 HP1BP3Q5SSJ5 553 aaPredicted RBP16.31■□□□□ 0.2
VTN-201ENST00000226218 FAM91A1Q658Y4 838 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 PLEKHA7Q6IQ23 1121 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 C15orf39Q6ZRI6 1047 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 MAP4K3Q8IVH8 894 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 ZBED8Q8IZ13 594 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.31■□□□□ 0.2
VTN-201ENST00000226218 PRR11Q96HE9 360 aaPredicted RBP16.31■□□□□ 0.2
VTN-201ENST00000226218 NSL1Q96IY1 281 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 RANBP17Q9H2T7 1088 aaKnown RBP16.31■□□□□ 0.2
VTN-201ENST00000226218 EHMT1Q9H9B1 1298 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 CPSF2Q9P2I0 782 aaKnown RBP16.31■□□□□ 0.2
VTN-201ENST00000226218 PCDHB2Q9Y5E7 798 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
VTN-201ENST00000226218 TM9SF1O15321 606 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 RTN3O95197 1032 aaPredicted RBP16.3■□□□□ 0.2
VTN-201ENST00000226218 SKIP12755 728 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 ITGB5P18084 799 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 NSFP46459 744 aaKnown RBP16.3■□□□□ 0.2
VTN-201ENST00000226218 PEX3P56589 373 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 GEMIN4P57678 1058 aaKnown RBP16.3■□□□□ 0.2
VTN-201ENST00000226218 SESN3P58005 492 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 ENPEPQ07075 957 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 GPS1Q13098 491 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 KRT72Q14CN4 511 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 SLC39A4Q6P5W5 647 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 ADGRD1Q6QNK2 874 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 RINLQ6ZS11 566 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 BANPQ8N9N5 519 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 WDR60Q8WVS4 1066 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 SLITRK1Q96PX8 696 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 PHACTR1Q9C0D0 580 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 SYNCQ9H7C4 482 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 GPRC5CQ9NQ84 441 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 KRT82Q9NSB4 513 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 HEY2Q9UBP5 337 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 SCOCQ9UIL1 159 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 TBX20Q9UMR3 447 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 WDR81Q562E7 1941 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 CAPN9O14815 690 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 PPEF1O14829 653 aaPredicted RBP16.3■□□□□ 0.2
VTN-201ENST00000226218 TJP3O95049 919 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 DHRS4L1P0CG22 281 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 CDK16Q00536 496 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 CYP24A1Q07973 514 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 OVGP1Q12889 678 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 SPP2Q13103 211 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 EFTUD2Q15029 972 aaKnown RBP eCLIP16.3■□□□□ 0.28e-7■■■■□ 24.5
VTN-201ENST00000226218 CCDC6Q16204 474 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 WDR72Q3MJ13 1102 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 FAM196AQ6ZSG2 479 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 CAPN12Q6ZSI9 719 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 CENPUQ71F23 418 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 TMEM161BQ8NDZ6 487 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 TCP10LQ8TDR4 215 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 PI4K2AQ9BTU6 479 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 MRIQ9BWK5 157 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 ARHGEF4Q9NR80 690 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 TAS2R1Q9NYW7 299 aa16.3■□□□□ 0.2
VTN-201ENST00000226218 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
VTN-201ENST00000226218 CFAP69A5D8W1 941 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 TGDSO95455 350 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 GH2P01242 217 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 CFHP08603 1231 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 KRT10P13645 584 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 RPS6KA3P51812 740 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 NOMO3P69849 1222 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 PDIA2Q13087 525 aaKnown RBP16.29■□□□□ 0.2
VTN-201ENST00000226218 DOK7Q18PE1 504 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 ATP13A4Q4VNC1 1196 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 KBTBD2Q8IY47 623 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 C11orf70Q9BRQ4 267 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 WDR83Q9BRX9 315 aaKnown RBP16.29■□□□□ 0.2
VTN-201ENST00000226218 ADAM33Q9BZ11 813 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
VTN-201ENST00000226218 SLC17A7Q9P2U7 560 aa16.29■□□□□ 0.2
VTN-201ENST00000226218 DENND3A2RUS2 1198 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 MAGEA13PA6NCF6 341 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 SMAPO00193 183 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 BANF1O75531 89 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 IL1BP01584 269 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 GYS1P13807 737 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 GLRA2P23416 452 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 PIK3CAP42336 1068 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 SLC5A9Q2M3M2 681 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 MFSD7Q6UXD7 560 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
VTN-201ENST00000226218 RCOR2Q8IZ40 523 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 NKD2Q969F2 451 aaPredicted RBP16.28■□□□□ 0.2
VTN-201ENST00000226218 VCPIP1Q96JH7 1222 aa16.28■□□□□ 0.2
VTN-201ENST00000226218 TRIM55Q9BYV6 548 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms