RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 FRMD8P1Q9BZ68 369 aaPredicted RBP23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 MTMR12Q9C0I1 747 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 DNALI1O14645 258 aaPredicted RBP23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 TNNC2P02585 160 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 PROZP22891 400 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 RPL7AP62424 266 aaKnown RBP23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 NR1H3Q13133 447 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 VGLL4Q14135 290 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 MPZL3Q6UWV2 235 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 POLNQ7Z5Q5 900 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 NCAPG2Q86XI2 1143 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 EFR3BQ9Y2G0 817 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 B4GALT4O60513 344 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 SLC25A27O95847 323 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 GSTA1P08263 222 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 VIMP08670 466 aaKnown RBP23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 POLR2BP30876 1174 aaKnown RBP23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 SSTR3P32745 418 aaPredicted RBP23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 GJC1P36383 396 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 VSTM1Q6UX27 236 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 ANKS1BQ7Z6G8 1248 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 ERICH1Q86X53 443 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 GPC2Q8N158 579 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 ALLCQ8N6M5 410 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 CFAP57Q96MR6 1250 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 GPR20Q99678 358 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 LHX5Q9H2C1 402 aa23.23■■□□□ 1.31
SMARCD2-201ENST00000225742 TMEM120BA0PK00 339 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 ACKR2O00590 384 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 MED7O43513 233 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 DNAJC8O75937 253 aaPredicted RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 IL18RAPO95256 599 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 BRD2P25440 801 aaKnown RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 VPS41P49754 854 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 SLC26A2P50443 739 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 ZNF252P-AS1Q0IIN9 211 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 MKRN4PQ13434 485 aaPredicted RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 ZNF699Q32M78 642 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 P3H1Q32P28 736 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 CCDC38Q502W7 563 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 GPAT2Q6NUI2 795 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 MFSD7Q6UXD7 560 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 DYDC1Q8WWB3 177 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 NKD2Q969F2 451 aaPredicted RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 ANKRD36BP1Q96IX9 119 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 MCEEQ96PE7 176 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 CSADQ9Y600 493 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 PAPPA2Q9BXP8 1791 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 TTLL13PA6NNM8 815 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 IRF6O14896 467 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 GJB6O95452 261 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 HOXC6P09630 235 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 MAGEA4P43358 317 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 SCTRP47872 440 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 HIRAP54198 1017 aaPredicted RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 MKRN3Q13064 507 aaKnown RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 TFDP3Q5H9I0 405 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 CELF3Q5SZQ8 465 aaKnown RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 RNF149Q8NC42 400 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 PPCSQ9HAB8 311 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 PTPRHQ9HD43 1115 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 PPP1R1BQ9UD71 204 aaPredicted RBP23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 ZNF148Q9UQR1 794 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 IVNS1ABPQ9Y6Y0 642 aa23.22■■□□□ 1.31
SMARCD2-201ENST00000225742 hCG_1818297A0A087WSY0 165 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 DNM1LO00429 736 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 RASSF9O75901 435 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 ITGAVP06756 1048 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 SRGAP2CP0DJJ0 459 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 VCPP55072 806 aaKnown RBP23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 MORF4L2Q15014 288 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 ICE2Q659A1 982 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 CKAP2Q8WWK9 683 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 RBM15Q96T37 977 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 PLCD4Q9BRC7 762 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 FZD8Q9H461 694 aa23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 TPX2Q9ULW0 747 aaKnown RBP23.21■■□□□ 1.31
SMARCD2-201ENST00000225742 ASPAP45381 313 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 GSCP56915 257 aaPredicted RBP23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 TFAMQ00059 246 aaKnown RBP23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 ZFYVE27Q5T4F4 411 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 TDRPQ86YL5 185 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 WDTC1Q8N5D0 677 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 FNIP1Q8TF40 1166 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 XYLT2Q9H1B5 865 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 WDR35Q9P2L0 1181 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 DNPEPQ9ULA0 475 aa23.2■■□□□ 1.3
SMARCD2-201ENST00000225742 ZBTB42B2RXF5 422 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 PI4K2BG5E9Z4 385 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 NOP56O00567 594 aaKnown RBP23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 BRAFP15056 766 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 ATF7P17544 494 aaPredicted RBP23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 IRX3P78415 501 aaPredicted RBP23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 LY6KQ17RY6 165 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 ATP13A4Q4VNC1 1196 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 ATF7IP2Q5U623 682 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 ARHGEF18Q6ZSZ5 1173 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 ELAC2Q9BQ52 826 aaKnown RBP23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 PHACTR1Q9C0D0 580 aa23.19■■□□□ 1.3
SMARCD2-201ENST00000225742 UBN1Q9NPG3 1134 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms