RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 EFTUD2Q15029 972 aaKnown RBP eCLIP14.98□□□□□ -0.011e-7■■■■□ 19.8
SHPK-201ENST00000225519 CTC1Q2NKJ3 1217 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 BBS9Q3SYG4 887 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 TDRPQ86YL5 185 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 PASD1Q8IV76 773 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 SCUBE1Q8IWY4 988 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 FAM81BQ96LP2 452 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 ECSITQ9BQ95 431 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 GINM1Q9NU53 330 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 DAGLAQ9Y4D2 1042 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 NUMBLQ9Y6R0 609 aa14.98□□□□□ -0.01
SHPK-201ENST00000225519 TFDP1Q14186 410 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 HIF1AQ16665 826 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 GLIS1Q8NBF1 620 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 ZSWIM2Q8NEG5 633 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 SHC3Q92529 594 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 MTBPQ96DY7 904 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 PTCD3Q96EY7 689 aaKnown RBP14.97□□□□□ -0.01
SHPK-201ENST00000225519 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
SHPK-201ENST00000225519 FAM111AQ96PZ2 611 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 HSD17B14Q9BPX1 270 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 LMCD1Q9NZU5 365 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 SPECC1L-ADORA2AF8WAN1 911 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 TYROBPO43914 113 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 BGNP21810 368 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 BAG6P46379 1132 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 NOVP48745 357 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 PRELPP51888 382 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 SLC18A1P54219 525 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 ARL4CP56559 192 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 CLEC16AQ2KHT3 1053 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 TRIM74Q86UV6 250 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 TRIM73Q86UV7 250 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 NMD3Q96D46 503 aaKnown RBP14.97□□□□□ -0.01
SHPK-201ENST00000225519 OXNAD1Q96HP4 312 aaPredicted RBP14.97□□□□□ -0.01
SHPK-201ENST00000225519 CLPTM1LQ96KA5 538 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 PAFAH2Q99487 392 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 SH2D3AQ9BRG2 576 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 ATXN10Q9UBB4 475 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 SHANK3Q9BYB0 1731 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 KRT1P04264 644 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 PADI6Q6TGC4 694 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 RIPOR1Q6ZS17 1223 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 C3orf62Q6ZUJ4 267 aa14.97□□□□□ -0.01
SHPK-201ENST00000225519 NAV1Q8NEY1 1877 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 KITP10721 976 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 MED21Q13503 144 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 KRT39Q6A163 491 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 MARK2Q7KZI7 788 aaKnown RBP14.96□□□□□ -0.01
SHPK-201ENST00000225519 SLC9A9Q8IVB4 645 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 PPP2R3CQ969Q6 453 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 MIS12Q9H081 205 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 MMADHCQ9H3L0 296 aaPredicted RBP14.96□□□□□ -0.01
SHPK-201ENST00000225519 RHBDL2Q9NX52 303 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.96□□□□□ -0.01
SHPK-201ENST00000225519 GGA1Q9UJY5 639 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 MYH11P35749 1972 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 SH3BGRP55822 239 aaPredicted RBP14.96□□□□□ -0.01
SHPK-201ENST00000225519 RHPN2Q8IUC4 686 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 MCOLN2Q8IZK6 566 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 OGFOD1Q8N543 542 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 ATP11CQ8NB49 1132 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 LXNQ9BS40 222 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 NMUR2Q9GZQ4 415 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 GALNT8Q9NY28 637 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 KANSL3Q9P2N6 904 aa14.96□□□□□ -0.01
SHPK-201ENST00000225519 FAM237BA0A1B0GVD1 139 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 PROSCO94903 275 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 CDK7P50613 346 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 TAS2R40P59535 323 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 ANKS1BQ7Z6G8 1248 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 ALYREFQ86V81 257 aaKnown RBP14.96□□□□□ -0.02
SHPK-201ENST00000225519 TMPRSS6Q8IU80 811 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 HIPK4Q8NE63 616 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 SEMA4DQ92854 862 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 TRIM11Q96F44 468 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 PI4K2AQ9BTU6 479 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 SMYD3Q9H7B4 428 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 ZWILCHQ9H900 591 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 CYLDQ9NQC7 956 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 COMMD3-BMI1R4GMX3 469 aa14.96□□□□□ -0.02
SHPK-201ENST00000225519 FDX1P10109 184 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 CCNFP41002 786 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 PSMC4P43686 418 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 SCNN1BP51168 640 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 GRAPQ13588 217 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 OTOP1Q7RTM1 612 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 CBWD2Q8IUF1 395 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 RELL1Q8IUW5 271 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 KLHL23Q8NBE8 558 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
SHPK-201ENST00000225519 VPS11Q9H270 941 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 OCEL1Q9H607 264 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 MARCOQ9UEW3 520 aaPredicted RBP14.95□□□□□ -0.02
SHPK-201ENST00000225519 IGKV6D-41A0A0C4DH26 115 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 SHMT1P34896 483 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 SCNN1DP51172 638 aa14.95□□□□□ -0.02
SHPK-201ENST00000225519 NFX1Q12986 1120 aaKnown RBP14.95□□□□□ -0.02
SHPK-201ENST00000225519 TRMT5Q32P41 509 aaKnown RBP14.95□□□□□ -0.02
SHPK-201ENST00000225519 ZC3H12AQ5D1E8 599 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms