RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PLXNB2O15031 1838 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 CHUKO15111 745 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 SRGAP2CP0DJJ0 459 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 CYP2C8P10632 490 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 CCNA1P78396 465 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 MCL1Q07820 350 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 CYB5D1Q6P9G0 228 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 ARMCX2Q7L311 632 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 CCDC25Q86WR0 208 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 PASD1Q8IV76 773 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 RHOT1Q8IXI2 618 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 UBR7Q8N806 425 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 GPRC5AQ8NFJ5 357 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 SNF8Q96H20 258 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 SGSM3Q96HU1 749 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 DDX23Q9BUQ8 820 aaKnown RBP23.52■■□□□ 1.35
CCDC9-201ENST00000221922 YY1AP1Q9H869 796 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 SLC45A1Q9Y2W3 748 aa23.52■■□□□ 1.35
CCDC9-201ENST00000221922 UMODL1Q5DID0 1318 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 ABLIM1O14639 778 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 MAMLD1Q13495 774 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 TFDP1Q14186 410 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 DUOXA2Q1HG44 320 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 SEZ6Q53EL9 994 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 ZBTB33Q86T24 672 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 PNMA8AQ86V59 439 aaPredicted RBP23.51■■□□□ 1.35
CCDC9-201ENST00000221922 PDGFCQ9NRA1 345 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 CHST7Q9NS84 486 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 PARVAQ9NVD7 372 aa23.51■■□□□ 1.35
CCDC9-201ENST00000221922 TNFSF9P41273 254 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 PHLDB2Q86SQ0 1253 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 HAUS2Q9NVX0 235 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 LSM8O95777 96 aaKnown RBP23.5■■□□□ 1.35
CCDC9-201ENST00000221922 GSTA1P08263 222 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 CFHP08603 1231 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 PROZP22891 400 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 CAV1Q03135 178 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 SNX1Q13596 522 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 ZNF792Q3KQV3 632 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 KATNAL2Q8IYT4 538 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 ZNF606Q8WXB4 792 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 DCLK3Q9C098 648 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 NIF3L1Q9GZT8 377 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 NSRP1Q9H0G5 558 aaKnown RBP23.5■■□□□ 1.35
CCDC9-201ENST00000221922 ERAP1Q9NZ08 941 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 SAMD15Q9P1V8 674 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 ASIC3Q9UHC3 531 aa23.5■■□□□ 1.35
CCDC9-201ENST00000221922 GAS8O95995 478 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 ARHGAP1Q07960 439 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 LONRF1Q17RB8 773 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 SGSM1Q2NKQ1 1148 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 C2CD6Q53TS8 623 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 TMEM63BQ5T3F8 832 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 TSHZ1Q6ZSZ6 1077 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 RHPN2Q8IUC4 686 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 PARP9Q8IXQ6 854 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 HERPUD2Q9BSE4 406 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 FZD8Q9H461 694 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 CPSF3Q9UKF6 684 aaKnown RBP23.49■■□□□ 1.35
CCDC9-201ENST00000221922 ZSWIM8A7E2V4 1837 aa23.49■■□□□ 1.35
CCDC9-201ENST00000221922 ACKR2O00590 384 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 TTC4O95801 387 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 CALB1P05937 261 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 CHKAP35790 457 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 LAMC2Q13753 1193 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 CCDC38Q502W7 563 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 LLGL2Q6P1M3 1020 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 CCDC50Q8IVM0 306 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 FEZF2Q8TBJ5 459 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 IPO4Q8TEX9 1081 aaKnown RBP23.48■■□□□ 1.35
CCDC9-201ENST00000221922 MTMR12Q9C0I1 747 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 VTA1Q9NP79 307 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 IP6K2Q9UHH9 426 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 SLC12A4Q9UP95 1085 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 TLR3O15455 904 aaKnown RBP23.48■■□□□ 1.35
CCDC9-201ENST00000221922 TCEA3O75764 348 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 ACSL3O95573 720 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 CST3P01034 146 aaPredicted RBP23.48■■□□□ 1.35
CCDC9-201ENST00000221922 VIMP08670 466 aaKnown RBP23.48■■□□□ 1.35
CCDC9-201ENST00000221922 CETPP11597 493 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 MMP8P22894 467 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 CETN2P41208 172 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 TRPC3Q13507 836 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 LLGL1Q15334 1064 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 MPZL3Q6UWV2 235 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 ATL2Q8NHH9 583 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 EXD1Q8NHP7 514 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 TRAPPC12Q8WVT3 735 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 ATG4AQ8WYN0 398 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 ELAC2Q9BQ52 826 aaKnown RBP23.48■■□□□ 1.35
CCDC9-201ENST00000221922 PTPRHQ9HD43 1115 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 NEU2Q9Y3R4 380 aa23.48■■□□□ 1.35
CCDC9-201ENST00000221922 ATP5DP30049 168 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 TAPT1Q6NXT6 567 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 ARHGEF2Q92974 986 aaKnown RBP23.47■■□□□ 1.35
CCDC9-201ENST00000221922 FAM212AQ96EL1 285 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 NFKBIZQ9BYH8 718 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 ZNF518BQ9C0D4 1074 aa23.47■■□□□ 1.35
CCDC9-201ENST00000221922 RBM47A0AV96 593 aaKnown RBP23.47■■□□□ 1.35
CCDC9-201ENST00000221922 PDHXO00330 501 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms