RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 EDN1P05305 212 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 HARSP12081 509 aaKnown RBP22.25■■□□□ 1.15
CCDC130-201ENST00000221554 CHKAP35790 457 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 NR1H3Q13133 447 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 C2CD6Q53TS8 623 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 MPZL3Q6UWV2 235 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 POLNQ7Z5Q5 900 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 ERICH1Q86X53 443 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 DDX23Q9BUQ8 820 aaKnown RBP22.25■■□□□ 1.15
CCDC130-201ENST00000221554 LHX5Q9H2C1 402 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 PPCSQ9HAB8 311 aa22.25■■□□□ 1.15
CCDC130-201ENST00000221554 RDXP35241 583 aaKnown RBP22.24■■□□□ 1.15
CCDC130-201ENST00000221554 MYL6P60660 151 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 IRX3P78415 501 aaPredicted RBP22.24■■□□□ 1.15
CCDC130-201ENST00000221554 LLGL1Q15334 1064 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 LONRF1Q17RB8 773 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 TREML2Q5T2D2 321 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 LLGL2Q6P1M3 1020 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 ZBTB33Q86T24 672 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 CFAP57Q96MR6 1250 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 PRMT1Q99873 361 aaKnown RBP22.24■■□□□ 1.15
CCDC130-201ENST00000221554 NINJ2Q9NZG7 142 aa22.24■■□□□ 1.15
CCDC130-201ENST00000221554 NOP56O00567 594 aaKnown RBP22.23■■□□□ 1.15
CCDC130-201ENST00000221554 ACKR2O00590 384 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 IRF6O14896 467 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 KRT1P04264 644 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 CD58P19256 250 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 PROZP22891 400 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 KYNUQ16719 465 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 TFDP3Q5H9I0 405 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 PPP1R15BQ5SWA1 713 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 CELF3Q5SZQ8 465 aaKnown RBP22.23■■□□□ 1.15
CCDC130-201ENST00000221554 RNF149Q8NC42 400 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 GPR20Q99678 358 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 MTMR12Q9C0I1 747 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 WDR35Q9P2L0 1181 aa22.23■■□□□ 1.15
CCDC130-201ENST00000221554 SRGAP2CP0DJJ0 459 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 TNFSF9P41273 254 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 MKRN3Q13064 507 aaKnown RBP22.22■■□□□ 1.15
CCDC130-201ENST00000221554 TRIP13Q15645 432 aaPredicted RBP22.22■■□□□ 1.15
CCDC130-201ENST00000221554 ZNF699Q32M78 642 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 ANKRD20A8PQ5CZ79 823 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 ZFYVE27Q5T4F4 411 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 SPOCD1Q6ZMY3 1216 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 CCDC13Q8IYE1 715 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 DYDC1Q8WWB3 177 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 FAM212AQ96EL1 285 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 PLCD4Q9BRC7 762 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 CCT8L1PA6NM43 557 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 CXCL11O14625 94 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 ABLIM1O14639 778 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 DNALI1O14645 258 aaPredicted RBP22.22■■□□□ 1.15
CCDC130-201ENST00000221554 RPL7AP62424 266 aaKnown RBP22.22■■□□□ 1.15
CCDC130-201ENST00000221554 GPAT2Q6NUI2 795 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 PCGF5Q86SE9 256 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 TTC13Q8NBP0 860 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 FNIP1Q8TF40 1166 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 CCT6BQ92526 530 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 FZD8Q9H461 694 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 SMARCAD1Q9H4L7 1026 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 PTPRHQ9HD43 1115 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 ZNF148Q9UQR1 794 aa22.22■■□□□ 1.15
CCDC130-201ENST00000221554 POLR2AP24928 1970 aaKnown RBP22.21■■□□□ 1.15
CCDC130-201ENST00000221554 ITGAVP06756 1048 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 GSTA1P08263 222 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 VIMP08670 466 aaKnown RBP22.21■■□□□ 1.15
CCDC130-201ENST00000221554 HIRAP54198 1017 aaPredicted RBP22.21■■□□□ 1.15
CCDC130-201ENST00000221554 GSCP56915 257 aaPredicted RBP22.21■■□□□ 1.15
CCDC130-201ENST00000221554 POU5F1BQ06416 359 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 MORF4L2Q15014 288 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 SEZ6Q53EL9 994 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 ATF7IP2Q5U623 682 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 ALLCQ8N6M5 410 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 NKD2Q969F2 451 aaPredicted RBP22.21■■□□□ 1.15
CCDC130-201ENST00000221554 MCEEQ96PE7 176 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 NFKBIZQ9BYH8 718 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 OSBPL7Q9BZF2 842 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 PHACTR1Q9C0D0 580 aa22.21■■□□□ 1.15
CCDC130-201ENST00000221554 A0A0G2JLL6 359 aaPredicted RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 HBP1O60381 514 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 KRT7P08729 469 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 MAGEA4P43358 317 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 IREB2P48200 963 aaKnown RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 LACTBP83111 547 aaPredicted RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 TFAMQ00059 246 aaKnown RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 HADHQ16836 314 aaKnown RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 LY6KQ17RY6 165 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 PPP1R21Q6ZMI0 780 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 GADL1Q6ZQY3 521 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 ARHGEF18Q6ZSZ5 1173 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 ANKS1BQ7Z6G8 1248 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 PRRT2Q7Z6L0 340 aaPredicted RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 LRRC34Q8IZ02 419 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 KAT2BQ92831 832 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 RBM15Q96T37 977 aaKnown RBP eCLIP22.2■■□□□ 1.145e-7■■■■□ 23.6
CCDC130-201ENST00000221554 FAM124BQ9H5Z6 455 aaPredicted RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 UBN1Q9NPG3 1134 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 TPX2Q9ULW0 747 aaKnown RBP22.2■■□□□ 1.14
CCDC130-201ENST00000221554 TMEM120BA0PK00 339 aa22.2■■□□□ 1.14
CCDC130-201ENST00000221554 SIGLEC16A6NMB1 481 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms