RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 JPH1Q9HDC5 661 aaPredicted RBP11.79□□□□□ -0.52
NEFM-201ENST00000221166 CYP26B1Q9NR63 512 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 COQ4Q9Y3A0 265 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 PIK3R2O00459 728 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 UNC5CO95185 931 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 NR1H3Q13133 447 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 TFDP1Q14186 410 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
NEFM-201ENST00000221166 ZNF677Q86XU0 584 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 THNSL1Q8IYQ7 743 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 TMEM35BQ8NCS4 154 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 OR5B17Q8NGF7 314 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 ZNF606Q8WXB4 792 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEFM-201ENST00000221166 SLC9A2Q9UBY0 812 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 CST8O60676 142 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 PTGER2P43116 358 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 EFTUD2Q15029 972 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEFM-201ENST00000221166 ANKRD20A2Q5SQ80 823 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 ANKRD20A1Q5TYW2 823 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 PRAMEF18Q5VWM3 479 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 GPAT2Q6NUI2 795 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 SPOCD1Q6ZMY3 1216 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
NEFM-201ENST00000221166 TRABD2AQ86V40 505 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 PSMC3IPQ9P2W1 217 aaPredicted RBP11.78□□□□□ -0.52
NEFM-201ENST00000221166 NUB1Q9Y5A7 615 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 BTAF1O14981 1849 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
NEFM-201ENST00000221166 WDR46O15213 610 aaKnown RBP11.78□□□□□ -0.52
NEFM-201ENST00000221166 LIASO43766 372 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 GARTP22102 1010 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 ADRA1DP25100 572 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 MARK3P27448 753 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 ARL4CP56559 192 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 NOMO3P69849 1222 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 MXRA7P84157 204 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 RIPK1Q13546 671 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 EMC2Q15006 297 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 TRIM72Q6ZMU5 477 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 NLRP9Q7RTR0 991 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 ANKS1BQ7Z6G8 1248 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 ZC3H18Q86VM9 953 aaKnown RBP11.78□□□□□ -0.52
NEFM-201ENST00000221166 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 CCDC60Q8IWA6 550 aaPredicted RBP11.78□□□□□ -0.52
NEFM-201ENST00000221166 KATNAL2Q8IYT4 538 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 KCTD6Q8NC69 237 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 CHMP2BQ9UQN3 213 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 ZNF536O15090 1300 aa11.78□□□□□ -0.52
NEFM-201ENST00000221166 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.52
NEFM-201ENST00000221166 ACTR2P61160 394 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 MGAT5Q09328 741 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 TCEAL1Q15170 157 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 EAPPQ56P03 285 aaPredicted RBP11.77□□□□□ -0.52
NEFM-201ENST00000221166 TXNRD3NBQ6F5E7 133 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 EP400NLQ6ZTU2 488 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 MON1BQ7L1V2 547 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 LMNTD2Q8IXW0 634 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 NIM1KQ8IY84 436 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.77□□□□□ -0.52
NEFM-201ENST00000221166 APOBEC3GQ9HC16 384 aaKnown RBP11.77□□□□□ -0.52
NEFM-201ENST00000221166 SMG5Q9UPR3 1016 aaKnown RBP11.77□□□□□ -0.52
NEFM-201ENST00000221166 RIPK3Q9Y572 518 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 NHSQ6T4R5 1651 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 ARFGEF1Q9Y6D6 1849 aa11.77□□□□□ -0.52
NEFM-201ENST00000221166 H0YCG3 227 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.53
NEFM-201ENST00000221166 RNF43Q68DV7 783 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 CAPRIN2Q6IMN6 1127 aaKnown RBP11.77□□□□□ -0.53
NEFM-201ENST00000221166 SCYL2Q6P3W7 929 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 APBB1IPQ7Z5R6 666 aaPredicted RBP11.77□□□□□ -0.53
NEFM-201ENST00000221166 PDIK1LQ8N165 341 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 EMC1Q8N766 993 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 DTX3LQ8TDB6 740 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 ARHGEF3Q9NR81 526 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 FZD1Q9UP38 647 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 H7C0C1 242 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 INHBAP08476 426 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 TMEM191BP0C7N4 346 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 ATP5OP48047 213 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 WNT7BP56706 349 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 GAD2Q05329 585 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
NEFM-201ENST00000221166 GNPTABQ3T906 1256 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 ZACNQ401N2 412 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 NIPA1Q7RTP0 329 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 ACTL9Q8TC94 416 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 ST6GALNAC4Q9H4F1 302 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 CHKBQ9Y259 395 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 SBF2Q86WG5 1849 aa11.77□□□□□ -0.53
NEFM-201ENST00000221166 KIF1CO43896 1103 aaKnown RBP11.76□□□□□ -0.53
NEFM-201ENST00000221166 ATP5HO75947 161 aa11.76□□□□□ -0.53
NEFM-201ENST00000221166 LYPLA2O95372 231 aa11.76□□□□□ -0.53
NEFM-201ENST00000221166 IRX4P78413 519 aa11.76□□□□□ -0.53
NEFM-201ENST00000221166 OTUD4Q01804 1114 aaKnown RBP11.76□□□□□ -0.53
NEFM-201ENST00000221166 TSNAXIP1Q2TAA8 658 aa11.76□□□□□ -0.53
NEFM-201ENST00000221166 CGB2Q6NT52 195 aa11.76□□□□□ -0.53
NEFM-201ENST00000221166 BZW1Q7L1Q6 419 aaKnown RBP11.76□□□□□ -0.53
NEFM-201ENST00000221166 AGGF1Q8N302 714 aaeCLIP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms